Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2307 ATGGTGGCCTGCAGAGGAATCTCGAGGTGCTGCAACATATGGAGCATCGTCGTCCATGTCATCAATGGGCGGTGGTTCATGGTGTTCGCTTCACTCCTAATCATGGTGACAGCCGGAACATTGTTCATGTACAGCATGTATTCGAACGACATAAAATTTGTTTTGGGTTACGACCAAACGACGTTGAATTTGCTGAGCTTTTTCAAGGATTTGGGCGCAAACGTAGGCGTTTTGTCTGGGCTTATTAACGAGGTTACACCACCGTGGGTGGTTCTATCCATCGGCGCCGTTTTGAATTTCTTTGGTTACTTTATGATTTGGTTGGCTGTTACGAAGCGAATCTCTGCCCCCAAAGTTTGGCAAATGTGTCTTTATATTTGTATTGGAGCCAATTCTCAATCTTTTGCTAATACAGGATCTCTTGTTACTTGTGTCAAGAACTTCCCCGAGAGCCGTGGTGTTGTTCTTGGTATCTTAAAGGGATACGTCGGACTGAGCGGCGCCATAACCACACAACTCTTCCATGCATTTTACGGCAACGACACCAAATCCTTAATTCTCCTCATCGGATGGCTCCCGGCGGCAATTTCCTTCGCATTTTTACGAACAATTCGTATTATGAAAGTTATCCGACAGCCAAACGAGCTTAAAGTCTTCTACAATTTCCTTTACATTTCTCTTGGCCTCGCCGGATTCCTAATGCTAATGATCATCGTAGAGAGCAAAACAGAGTTCACTCAAAGCGAATACGGTGGCAGCGCCGCTGTCGTCCTTCTCCTCCTCTTCCTCCCACTCGCCGTCGTCATCATTGAAGAATACAATCTCTGGAAACTCAAAACCGTCCTCATTAAATCCCCAAATCCCTCTGTTCAAATCGTAACAGAGAAATTCCCAAAACCAGAGCAACTCCAAAAAACAGAGCATCCAAAACAACAACAAAAAGAACCATCTTGTTGGACAACAATTTTCAGCCCACCAGAACGCGGCGAGGATTTCACAATTCTCCAAGCTCTCTTCAGTGTCGACATGCTGATTCTATTACTCTCTGCAATTTGCGGCGTCGGAGGGACGTTAACGATGATCGACAATTTGGGTCAAATCGGAATGTCTTTGGGATACCCAAAAAGAAGCATTAGCACATTTGTAACATTAATCAGCATTTGGAATTACCTCGGTCGAGTTGCCTCTGGTTTCGTCTCTGAAATCGTTTTGACAAAATACAAATTCCCTCGTCCTTTAATGTACTCTTTGACCCTTCTTTGTTCCTGCATTGGCCATTTGATGATCGCATTTGATGTTCCAAATGGGCTTTATGTGGCTTCCGTCGTAATCGGATTTTGTTTTGGAGCACAGTGGCCATTGATTTTCGCAATAATTTCCGAACTTTTTGGATTGAAATATTACTCAACGCTTTTCAATTTTGGGGCAGTGGCGAGCCCAATTGGACTTTATGTTCTGAATGTGAAAGTGGCTGGAAATTTCTACGATAGAGAGGCAGAGAAACAGCTCAGAGCAAAAGGGATGATTAGAAAAGCAGGGGAAGAATTAAAGTGCCTTGGAAGGGAATGCTTTAAGCTTTCATTCATTGTAATTACTGCAGTTACTTTGTTGGGTATGTTTCTTTCGTTGATTTTAGTGCTTAGAACGAGGAGTTTCTACAAGAGTGATCTTTATAAGAAGTTTCGAGATGAAGCTAAAACAGAGGTGGCCGGAAATGGGGCTGTGGCGGCGGCCGAAGCAGCGGAAGAGACGAGAAAATGA 1761 43.84 MVACRGISRCCNIWSIVVHVINGRWFMVFASLLIMVTAGTLFMYSMYSNDIKFVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAVTKRISAPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAITTQLFHAFYGNDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLGLAGFLMLMIIVESKTEFTQSEYGGSAAVVLLLLFLPLAVVIIEEYNLWKLKTVLIKSPNPSVQIVTEKFPKPEQLQKTEHPKQQQKEPSCWTTIFSPPERGEDFTILQALFSVDMLILLLSAICGVGGTLTMIDNLGQIGMSLGYPKRSISTFVTLISIWNYLGRVASGFVSEIVLTKYKFPRPLMYSLTLLCSCIGHLMIAFDVPNGLYVASVVIGFCFGAQWPLIFAIISELFGLKYYSTLFNFGAVASPIGLYVLNVKVAGNFYDREAEKQLRAKGMIRKAGEELKCLGRECFKLSFIVITAVTLLGMFLSLILVLRTRSFYKSDLYKKFRDEAKTEVAGNGAVAAAEAAEETRK 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34624692 34627154 + CrPI670011_05g023070.1 Cre05g2307 498820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2307 586 CDD MFS_Mch1p_like 23 539 - -
Cre05g2307 586 Pfam Nodulin-like 24 269 IPR010658 -
Cre05g2307 586 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 562 - GO:0016020(PANTHER)
Cre05g2307 586 SUPERFAMILY MFS general substrate transporter 24 551 IPR036259 -
Cre05g2307 586 FunFam Nodulin family protein 334 555 - -
Cre05g2307 586 Gene3D MFS general substrate transporter like domains 339 554 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0571 Cre-Chr3:4416152 Cre05g2307 Cre-Chr5:34624692 9.70E-112 dispersed
Cre03g0574 Cre-Chr3:4425006 Cre05g2307 Cre-Chr5:34624692 1.60E-188 dispersed
Cre05g2307 Cre-Chr5:34624692 Cre08g0732 Cre-Chr8:20379496 1.00E-211 dispersed
Cre05g2306 Cre-Chr5:34613215 Cre05g2307 Cre-Chr5:34624692 6.00E-283 tandem
Cre05g2307 Cre-Chr5:34624692 Cre05g2308 Cre-Chr5:34634909 2.60E-199 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2307 - - - 0.0