Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2308 ATGGAGGGATTGGGCATGAAATCCTTTACACTAAAACTAATCAAAGGGTCATGGTTCATGATGTTTGGGTCGTTCCTAATCATGTCGATGGCAGGCATCCCCTACATGTTCGGCTTGTATTCCAGCACCATAAAATCCGTCTTAGGGTACGACCAAACAACCCTAAACTTCATAAGTTTCTTCAAAGACGTCGGTACAACGGTCGGCGTCGTAGCTGGGTTAATCAACGAAGTAACCCCGCCATGGTCCATCCTAGCCATGGGAGCTCTCCTCAACTTCTTCGGCTACTTCATGATCTGGTTATCCGTCTCCCAGAAAATCCCGACTCGCGTCTGGTTAATGTGTCTCTACATCTGTGTCGGCGCCAACGCAACGACGTTCGCCAACACGGGCGCGTTAGTTACGTGCGTAAAGAACTACCCGCAACGGCGTGGCGTCGTGATCGGGATTTTGAAAGGGTATATGGGATTGAGTGGGGCAATTGTGACGCAATTGTATCATGCTATATATGGGAAAGATGAGAAGTCGTTGATATTGTTGTTGGGGTGGTTGCCTGCGGTGGTGTCGTTCGTGTTTTTGCCGACGGTACGGCGGATGAAGGTGGAGCATGAGGAGGATGAGTTGAAGGTTTTTTATAGGTTTTTGTATATATCGTTGGGATTGGCAGGGTTTTTGATGATGATGATAATTTTGCAACAAAAGTTTAGTTTTGATAGAGGGGAATATGGAGGGAGTGCGGCGGTGGTTACTATTTTGTTGCTTTTTCCTATCGTCGTGGTTGTTGCTCAAGAGTTTAAGGCGTGGCGGCGGTTGAATAAGCCGGCGGTTCTTGAAAATGGCCTTTCTCCCCTGCCGATGTCACCACCATTGAAGAACACAACACCAATGTCACTCCTCCCGAAGAAACCAAAACCCCAACAACAACCCATCAAAGTCGAGTGGTGGAAAAACGTATTTAATCCCCCACCAAGAGGAGACGATTGGACAATCCTCCAAGCTCTGTTCAGCTTCGACATGTTCCTCCTCTTCCTTGCCACCGCCTGCGGCGTCGGCGGCACCCTCACCGCCATCGACAACCTCGGCCAAATCGGTCAATCCCAAGATTACCCCAAAAAAAGCATCAGCACATTCGTTTCCCTCGTCAGCATCTGGAATTACCTCGGCCGAGTCATGGCCGGATTCCTCTCCGAACATTTACTCATCAAATACAAATTCCCCCGTCCTTTAATGCTTACGATCGTTCTCCTTCTTTCCTGCATTGCCCATCTTCTAATCGCCTTCAATCCCGCCGGCGGCCTTTACATCGCCTCTGTTTTGACCGGATTCTGTTACGGCGCTCAATGGCCTCTGCTTTTCGCCATTGTTTCAGAGATTTTTGGGCTGAAATATTACGCGACTTTGTATAATTTCGGGTCGGTGGCTAGCCCAGTAGGGCTTTATGTGTTAAATGTGAATGTGGCTGGGTATTTGTATGATAAGGAAGCGAAGAAGCAGCTGGCGGTGGCGGGGAGGATTAGGAAAACAGGGGAGGAGTTGATTTGTAATGGGACGGTGTGTTTTAAGCTTTCTTTTGTGATTATTACGGCGGTGAGTTTGTTTGGGGCTTTGGTTTCCTTGGTTTTAGTGTTGAGGACCAAGAAGTTTTATAAGAGTGATATTTATAGGAAGTTTAGAGAGGCAGAGGAGGCCGCCGCCGCGGCGGAGAAAGAGGAGGAGGATGGTGGTGATGGAGTTAGAAACGGCGGCGGTTTGGTGGAGGAGTCGAAACAGGGGCTTAGGCAATGA 1785 48.74 MEGLGMKSFTLKLIKGSWFMMFGSFLIMSMAGIPYMFGLYSSTIKSVLGYDQTTLNFISFFKDVGTTVGVVAGLINEVTPPWSILAMGALLNFFGYFMIWLSVSQKIPTRVWLMCLYICVGANATTFANTGALVTCVKNYPQRRGVVIGILKGYMGLSGAIVTQLYHAIYGKDEKSLILLLGWLPAVVSFVFLPTVRRMKVEHEEDELKVFYRFLYISLGLAGFLMMMIILQQKFSFDRGEYGGSAAVVTILLLFPIVVVVAQEFKAWRRLNKPAVLENGLSPLPMSPPLKNTTPMSLLPKKPKPQQQPIKVEWWKNVFNPPPRGDDWTILQALFSFDMFLLFLATACGVGGTLTAIDNLGQIGQSQDYPKKSISTFVSLVSIWNYLGRVMAGFLSEHLLIKYKFPRPLMLTIVLLLSCIAHLLIAFNPAGGLYIASVLTGFCYGAQWPLLFAIVSEIFGLKYYATLYNFGSVASPVGLYVLNVNVAGYLYDKEAKKQLAVAGRIRKTGEELICNGTVCFKLSFVIITAVSLFGALVSLVLVLRTKKFYKSDIYRKFREAEEAAAAAEKEEEDGGDGVRNGGGLVEESKQGLRQ 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34634909 34636881 + CrPI670011_05g023080.1 Cre05g2308 498821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2308 594 Pfam Nodulin-like 18 261 IPR010658 -
Cre05g2308 594 Pfam Major Facilitator Superfamily 341 547 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cre05g2308 594 CDD MFS_Mch1p_like 18 535 - -
Cre05g2308 594 SUPERFAMILY MFS general substrate transporter 20 549 IPR036259 -
Cre05g2308 594 Gene3D MFS general substrate transporter like domains 328 550 IPR036259 -
Cre05g2308 594 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 17 558 - GO:0016020(PANTHER)
Cre05g2308 594 Coils Coil 550 570 - -
Cre05g2308 594 MobiDBLite consensus disorder prediction 566 594 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2306 Cre-Chr5:34613215 Cre05g2308 Cre-Chr5:34634909 1.20E-195 dispersed
Cre05g2308 Cre-Chr5:34634909 Cre08g0732 Cre-Chr8:20379496 8.20E-217 dispersed
Cre05g2307 Cre-Chr5:34624692 Cre05g2308 Cre-Chr5:34634909 2.60E-199 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2308 - - - 0.0