Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2338 ATGGCTTCTTTCTCCACTTCATCCACTTTCTTCCTCATTGCCTTTTTCCTCTCCGGTTTAATCTTCTTCCTCACCAGAAAACTCATAAAAAACCGCCCCAAACTCCCTCCTGGACCGCCCGGTTGGCCCATCGTCGGCAACCTCTTCCAAGTCGCCCGGTCCAAAAAACCCTTCTTCGAATACATCGAAGATCAACGCCGAATTTACGGCCCAATTTTTACCCTCAAAATGGGCACTACAACAATGGTTGTATTAAGCGATTCGAATCTCGTTCACGAAGCTCTAATTAAAACGGGGGCAGTTTTTGCTGACCGGCCCAGAGAAAATCCTACCCGGATTATATTCAGTAGCAATAAATTTTCAGTCAATTCGGCGGTTTACGGCCCTATATGGCGGACCCTCCGCCGCAACATGGTGGAAAATATGCTCAGCTCCGGCAAGGTAAAGGAGTTTCATGGCGTGAGAGAAAAAGCAATGGAAAAATTCGTGAAGCGGTTACGAGATGAAGCAAAGGCTAATAACGGCGTCGTTTTGGTACTTAAAAACGCGCGTTTTGCGGTGTTTTGGATTCTGTTGACAATGTGTTTCGGATTCGAGATGGAAGAAGAAACGGTTGAGAAAATGGACGAGATTCTCAAATCCGTTTTGATCACACTCGAACCAAGAATCGACGATTATTTCCCGATTTTAACTCCTTTTTTCTCTAGAGAAAAAAATCGAGCGAATCTCGTTCGGAAAAAACAAGTCGAATTCGTCATTGAGTTAATTAATCGGCGGCGGCGGGCGCTGGAGAATCCGGCGTCCGACGGCACTGCGACGTCATTTTCGTACCTCGACACGCTTTTCGATTTGAAAATCGACGGCCGCGGTGGCGGAGGGAAATCGTCGGCGACGGACGAGGAATTGGTGACACTTTGTTCGGAGTTTTTGAACGGCGGGACGGACACGACGGCGACGGTGATAGAGTGGGGGATGGCGGAATTGATAGGGAATCCGGAAGTTCAGAGGAAAGTTGTGGAAGAAATTAAAGAGACGGTTGGTGAGAGAAAAGTAGAGGAAAAAGACATAGAGAAAATGGTATATTTACAAGCGGTTGTGAAAGAAGTGCTGCGGAAACATCCTCCGACATTCTTTGTTTTGACGCACTCCGTGACGGAGCCGGCGAAATTGGCAGGATACGACATCCCGAAAGACACGAACGTGGAATTCTTCCTACCCGCCATCGGAAGGGATCCGAAGCTGTGGAAGAATCCAGAGAAATTCGAACCGGAAAGATTTTACTCCGGCAAGGAAGAAGCCGACATTACCGGTGTCACTGGCGTCAGAATGATGCCGTTCGGCGTAGGGCGACGGATCTGCCCGGGCTTGGGATTGGCCACCGTCCACATTCATTTAATGCTTGCCAGAATGCTGCAGGAATTTGAATGGACCGCCTATCCGCCGTCCAGCTCCGTCGACTTTTCATGGAAGATGGAGTTCACCGTCGTCATGAAGAATCCTCTTAGAGCTATTGTCAAATCAAGGGTTTAA 1530 48.37 MASFSTSSTFFLIAFFLSGLIFFLTRKLIKNRPKLPPGPPGWPIVGNLFQVARSKKPFFEYIEDQRRIYGPIFTLKMGTTTMVVLSDSNLVHEALIKTGAVFADRPRENPTRIIFSSNKFSVNSAVYGPIWRTLRRNMVENMLSSGKVKEFHGVREKAMEKFVKRLRDEAKANNGVVLVLKNARFAVFWILLTMCFGFEMEEETVEKMDEILKSVLITLEPRIDDYFPILTPFFSREKNRANLVRKKQVEFVIELINRRRRALENPASDGTATSFSYLDTLFDLKIDGRGGGGKSSATDEELVTLCSEFLNGGTDTTATVIEWGMAELIGNPEVQRKVVEEIKETVGERKVEEKDIEKMVYLQAVVKEVLRKHPPTFFVLTHSVTEPAKLAGYDIPKDTNVEFFLPAIGRDPKLWKNPEKFEPERFYSGKEEADITGVTGVRMMPFGVGRRICPGLGLATVHIHLMLARMLQEFEWTAYPPSSSVDFSWKMEFTVVMKNPLRAIVKSRV 509
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 34996964 34999328 + CrPI670011_05g023380.1 Cre05g2338 498851
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2338 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 18 506 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Cre05g2338 509 CDD CYP77_89 68 502 - -
Cre05g2338 509 FunFam Cytochrome P450 family protein 29 509 - -
Cre05g2338 509 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 SUPERFAMILY Cytochrome P450 36 508 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 Gene3D Cytochrome P450 28 509 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2338 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre05g2338 509 Pfam Cytochrome P450 36 497 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1826 Cre-Chr4:36045278 Cre05g2338 Cre-Chr5:34996964 7.30E-121 dispersed
Cre05g2338 Cre-Chr5:34996964 Cre09g2434 Cre-Chr9:43728025 1.30E-90 dispersed
Cre05g2338 Cre-Chr5:34996964 Cre08g0760 Cre-Chr8:20648262 4.70E-205 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2338 K21995 - csv:101217068 872.848