Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2490 ATGCGATCGCCTCAGATCCTACCTATCACCCAGCCCCCTTCGTCGTCTCCATTTTCCTCCGGGGGCTCCGCCGCAAATTCGATTATGGCAACCACATCTACTGCCATAGACATAATGTTGCTTAAAGAAGACGATGAACAGACGACTGGAGTTCTTGTTTCTCCGTTGTTCGAGGATGATAAGACGATAGCTCATAAGCCCCTTCTTCCTAGGACTTCAAGCTATGCATCCTCCACATCCAGTTCCTCCTCAGGAAGCTGTATGTACAAGCAGAAGCGGAGGCGAGTTAAGAGCGAAGACCTTTTGTCCTTTCTCTCCGGTGATGTCCGCCACCAGACTGTTGATCATGATGTCGAGAATGTCGATGTTGAGAGAGCTGAGAGATTTCTACTGACCCGCTTCGGTTTGAAACTCTCGAAATATATTCGGGTAGCATTCAGATGGATTGCAAGATTTCTCGCACTTGGTTGCTATTCATTGTTTCTTCTTCCAGGTTTTCTTCAAGTTGGATACTATTATTTCTCATCCAGTCAGATACGCAGAAGTATACCCTATGGTGATAAACCGAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGGCCAAAACCAGTTGTTGCATTTATCACTGGTGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCAGAAAGAGATGTCATTGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACCATGAGTGATATGATTGATGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAATATTAGAGAATTTGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGCGCACATATAGCTGCCTGCACACTTTTGGAGCACGCAATGAAAGAGGTTCGCAAAGTAGAAAGTATCTCTTGGAGTGTGTCCCAGATCAAAGCTTATTTTGGTTTGTCAGGAGGGTATAATTTGCTCAATCTGGTAGACTACTTTCACTCTCGAGGTCTATCTCGTTCTCTTTTTCTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAAGTAATGATCTTGGAAGAACCCAACATAGGACCAGCAGTCCCGATTCTTCCTCCCATCATTTTATTCCATGGAACAGCAGACTATTCTATACCATCAGATGCTAGTAAAACTTTTGCTGAGGCTCTTCAAAGCGTTGGAGTGAAAGCCGAAACATTTTTCTATGAAGGAAAGACGCATACAGATGTATTTGTTCAGGATCCGTTGAGGGGTGGGAGAGATCAGATGTTTGAAGATCTTGTTGCGATCATCCATGCCAATGATGCAGAAGCATTGGCGAAAGATGCGGTGGCACCTCCAAGAAGACGCTTTGTACCTGAATTTATGTTGATGTTGGCTCGTTGTGTGACAAATGGAGGAAAAATTGGAAAAATGAATTTCACATACGAGCTAGATCATAGTTTATGGAGTGCAGCAATTGCGGCAAAATGGAATTGGCTAGCTTTGAACTCTCCGTAA 1539 43.4 MRSPQILPITQPPSSSPFSSGGSAANSIMATTSTAIDIMLLKEDDEQTTGVLVSPLFEDDKTIAHKPLLPRTSSYASSTSSSSSGSCMYKQKRRRVKSEDLLSFLSGDVRHQTVDHDVENVDVERAERFLLTRFGLKLSKYIRVAFRWIARFLALGCYSLFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEHAMKEVRKVESISWSVSQIKAYFGLSGGYNLLNLVDYFHSRGLSRSLFLSIMEGEQSLKRFSPEVMILEEPNIGPAVPILPPIILFHGTADYSIPSDASKTFAEALQSVGVKAETFFYEGKTHTDVFVQDPLRGGRDQMFEDLVAIIHANDAEALAKDAVAPPRRRFVPEFMLMLARCVTNGGKIGKMNFTYELDHSLWSAAIAAKWNWLALNSP 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36278616 36282218 - CrPI670011_05g024900.1 Cre05g2490 499003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2490 512 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 174 428 - -
Cre05g2490 512 Pfam BD-FAE 193 403 IPR049492 -
Cre05g2490 512 Gene3D alpha/beta hydrolase 173 428 IPR029058 -
Cre05g2490 512 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 108 445 IPR050300 GO:0016298(PANTHER)
Cre05g2490 512 SUPERFAMILY alpha/beta-Hydrolases 181 446 IPR029058 -
Cre05g2490 512 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
Cre05g2490 512 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1365 Cre-Chr5:15664196 Cre05g2490 Cre-Chr5:36278616 1.10E-133 dispersed
Cre05g2490 Cre-Chr5:36278616 Cre06g1628 Cre-Chr6:12264934 1.20E-142 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2490 K15889 - csv:101206426 869.766