Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2494 ATGGCGGCCGTATCACCGGCGCCTAATTCATCTCCGTCGCCGGCTTCTCCCTCCACTCCATCTCCGCCGCCTCCGGTCGCATCTAATTCCCCACCTAGTACTCCGTCACTGTCGCCGCCGCAACAATCGCCTCCTCCGAATCCGTCTGACTCCGCGACTCCCACTTCATCTCCTCCTCCGCCGTCTCGTCAACCATCTGCTGCTTCACCTCCACCTGCATCTGAAACTCCGCCGCCATCAACACCCGCATTGTCTCCTCCGCCGCCTCGGATGGTTCCGCCGGCAACTCCACCATCAACTCCGTCCAATGCTCCACCCCCATCAACACCGGACCCTCCACCACCATCAGCAACCCCACCAGTAAGCTCCACTCCACCAACGCCATCTAATCCCCCACCAAATTCATCTCCACCTCCTGCAGCACAGCCTCCTCAATCCCCTCCACAATCATCAAAACCACCTGAAAACCCCCCTCCGCTGCCGCCGCCACCACCACAAGCAAACCCGCCGGATAATCCAGCGCCGCCGCCACAGCCCACAAACCCACCTGGGAATTCACCTCCTACGCCACCATCAGCACTGCCTCCAGCTACCTCACCTCCTTCCCCAGCATCCATACCTCCAAGAAATTCACCTCCACCCCCAAGGCTTACTCCTCCTCCCGGTGAGCCCTCACTTTCAAGTCCTCCTCCCAGGTCATCACCGCCCCCATCTCCTCCACCACCACCGCCGTCACATCTTTCTCCTCCATTACCGTCTAAACCCCCAACATTGCCGTCAGGAAATCGTACGGACGATGGTTCTGGTCCTATTGATGGAGGAGCAAACTCGAAATCCAACAGCAATGGAGGGATCAGTAGTGGGGGTGTGATCGCCATTGGAGTAGTGGCAGGAATTATAGTGCTTTCCATAATTGGGTTTGTTGTTTGGTACATCAGGAGGCCAAGGAAAAATGATTCTGGGCGTGGAGGTTACATTATGCCATCCTCTCTGGGCTCCTCTCCTAAGTCGGAAACATCCCTTATGAAGGTCCATTCCACAGTTCATCAAGACATACATGCCAGTGGCAGTGGCAGTGGCAGTGGCAGTGGTGGAATATACACTCCAAAAGAGCTTGGTGGGTTGGGCAGTTCGAGGCCATTGTTTACATACGAAGAACTCTTCAAAGCAACAGATGCATTTTCTACTCAGAACCTTTTAGGAGAAGGAGGATTTGGTTCTGTTTATAAAGGATATCTACCAGATGGAAGAGTGGTTGCAGTGAAGGAGCTAAAGATCGGTGGTGGTCAGGGTGAGCTGGAATTCAAAGCTGAAGTTGAGATTATTGGTCGTGTACACCATCGCCATTTGGTTTCTCTTGTGGGCTATTGTATTTCAGAGCATCAAAGGTTGCTGGTCTATGATTATGTCCCTAACAATTCCCTTTACTACCATCTTCATCTCAAAGGGGATGGCGAGCTCGTTCTGGAATGGACAAAGCGCATTAAGATCGCAGCTGGTGCAGCTCGGGGAGTTGCTTATCTTCATGAAGACTGCCACCCTCGAATTATCCACCGTGATATCAAATCTTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGGGTTTCTGACTTTGGGCTTGCTAAATTAGCTCTCGACGAACAAACTCATATAACAACCCGTGTTGTGGGAACTTTTGGATATGTTGCCCCTGAATATGCATCGAGTGGAAAGTTAACTGAGAGGTCAGATGTATATTCTTTTGGAGTTGTACTTCTTGAGCTGATTACTGGTCGAAAGGCTGTGGATGCATCCCAACCAATGGGGAATGAGAGCCTTGTCGAATGGGCTCGGCCTTTACTAAACCATGCACTCGACAGCCAAGATTTCGAAAAATTGGTGGACCCAAGGCTTGAAAGGAACTACATCGAGAGTGAAATGTTGGGGATGATAGGAATAGCTGCTGCTTGCGTGCGGCACGCGTCTGCCAAGAGACCGCAGATGGGACAGGTTGTTAGAGCTTTTGATAGTTTAGCCACAGCAGATTTAAGTAATGGAATGAGATTCGGGGAGAGTCAAGCTTTCGACTCCGGTCAACAATCTGCTGAAATTAGATTTTTCCGAATGCTGGCCTTCGGTAACCAAGATTACAGTTCAGACTTTTATAGCCAAGGTAGCTCAAATGCCTGA 2172 50.97 MAAVSPAPNSSPSPASPSTPSPPPPVASNSPPSTPSLSPPQQSPPPNPSDSATPTSSPPPPSRQPSAASPPPASETPPPSTPALSPPPPRMVPPATPPSTPSNAPPPSTPDPPPPSATPPVSSTPPTPSNPPPNSSPPPAAQPPQSPPQSSKPPENPPPLPPPPPQANPPDNPAPPPQPTNPPGNSPPTPPSALPPATSPPSPASIPPRNSPPPPRLTPPPGEPSLSSPPPRSSPPPSPPPPPPSHLSPPLPSKPPTLPSGNRTDDGSGPIDGGANSKSNSNGGISSGGVIAIGVVAGIIVLSIIGFVVWYIRRPRKNDSGRGGYIMPSSLGSSPKSETSLMKVHSTVHQDIHASGSGSGSGSGGIYTPKELGGLGSSRPLFTYEELFKATDAFSTQNLLGEGGFGSVYKGYLPDGRVVAVKELKIGGGQGELEFKAEVEIIGRVHHRHLVSLVGYCISEHQRLLVYDYVPNNSLYYHLHLKGDGELVLEWTKRIKIAAGAARGVAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDEQTHITTRVVGTFGYVAPEYASSGKLTERSDVYSFGVVLLELITGRKAVDASQPMGNESLVEWARPLLNHALDSQDFEKLVDPRLERNYIESEMLGMIGIAAACVRHASAKRPQMGQVVRAFDSLATADLSNGMRFGESQAFDSGQQSAEIRFFRMLAFGNQDYSSDFYSQGSSNA 723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36345912 36349645 - CrPI670011_05g024940.1 Cre05g2494 499007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2494 723 MobiDBLite consensus disorder prediction 10 257 - -
Cre05g2494 723 Gene3D Transferase(Phosphotransferase) domain 1 470 686 - -
Cre05g2494 723 FunFam Proline-rich receptor-like protein kinase PERK8 367 469 - -
Cre05g2494 723 SUPERFAMILY Protein kinase-like (PK-like) 377 667 IPR011009 -
Cre05g2494 723 FunFam proline-rich receptor-like protein kinase PERK8 470 683 - -
Cre05g2494 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre05g2494 723 CDD STKc_IRAK 400 672 - -
Cre05g2494 723 SMART serkin_6 394 642 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g2494 723 PRINTS Proline rich extensin signature 61 86 - -
Cre05g2494 723 PRINTS Proline rich extensin signature 18 34 - -
Cre05g2494 723 PRINTS Proline rich extensin signature 36 53 - -
Cre05g2494 723 PRINTS Proline rich extensin signature 1 18 - -
Cre05g2494 723 CDD TM_EGFR-like 286 318 - -
Cre05g2494 723 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524(InterPro)
Cre05g2494 723 Gene3D Phosphorylase Kinase; domain 1 371 469 - -
Cre05g2494 723 ProSiteProfiles Protein kinase domain profile. 394 672 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g2494 723 Pfam Protein kinase domain 395 603 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g2494 723 MobiDBLite consensus disorder prediction 1 283 - -
Cre05g2494 723 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 253 701 IPR047117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1943 Cre-Chr4:36934618 Cre05g2494 Cre-Chr5:36345912 1.10E-45 dispersed
Cre05g2075 Cre-Chr5:32680713 Cre05g2494 Cre-Chr5:36345912 5.50E-38 dispersed
Cre05g2494 Cre-Chr5:36345912 Cre05g2700 Cre-Chr5:37929580 1.20E-132 dispersed
Cre07g1694 Cre-Chr7:32374771 Cre05g2494 Cre-Chr5:36345912 1.40E-55 dispersed
Cre07g1976 Cre-Chr7:35186442 Cre05g2494 Cre-Chr5:36345912 3.50E-59 dispersed
Cre09g1746 Cre-Chr9:35817758 Cre05g2494 Cre-Chr5:36345912 1.70E-60 dispersed
Cre09g1862 Cre-Chr9:37144512 Cre05g2494 Cre-Chr5:36345912 3.70E-70 dispersed
Cre11g0930 Cre-Chr11:6569863 Cre05g2494 Cre-Chr5:36345912 3.80E-40 dispersed
Cre11g2123 Cre-Chr11:32932392 Cre05g2494 Cre-Chr5:36345912 6.30E-64 dispersed
Cre05g2494 Cre-Chr5:36345912 Cre05g2498 Cre-Chr5:36409237 7.90E-69 proximal
Cre02g2556 Cre-Chr2:38817138 Cre05g2494 Cre-Chr5:36345912 5.90E-30 transposed
Cre03g0710 Cre-Chr3:5972119 Cre05g2494 Cre-Chr5:36345912 1.30E-55 transposed
Cre09g1745 Cre-Chr9:35783024 Cre05g2494 Cre-Chr5:36345912 3.70E-53 transposed
Cre11g1014 Cre-Chr11:7454804 Cre05g2494 Cre-Chr5:36345912 3.20E-145 wgd
Cre02g2149 Cre-Chr2:35080213 Cre05g2494 Cre-Chr5:36345912 2.50E-75 wgd
Cre03g0961 Cre-Chr3:8461976 Cre05g2494 Cre-Chr5:36345912 3.40E-33 wgd
Cre05g2494 Cre-Chr5:36345912 Cre09g1938 Cre-Chr9:38211619 7.20E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64173 PF00069 Pkinase 3.20E-43 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2494 - - - 0.0