Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2495 ATGGCAGGTTCTTACGCATTACTCACCCGTCCACTATTGGAAACACCACTTCCCGTCCGACTTGCATACCCACGGGTGGAAACTTTTACAGAGATTCCGTCCTCCACAGGTCCCGTCCCGTCGTTGCAGAGAATCCGCCGCAGGTCCCGTCGCGTCGTCGCAGAGATTCCGCCGCAGGTCCCGTCGCGTCGTCGCATAGATTCCCTGCCACCGCTGCAGCTGCCGTCGCCCGTGACCTATGGTCGAGGGTTGAACTCTCGACCATGTCTCTTTAAATTCCGCCGAGTCCCTTCTTCCTCCCACTATTTCTTCTTCCTCCAATTCCTTGCGTTTACTCTTTCATCCGAGGCTCCGAGCACTCCCACCTTGCGTTTCCCCTTTGCATCCGAGCACTCTCACATTTCTTCTTCCCGTTTGGACCCTTGCGTTTCTTGTTTCATCCGAGCACTCCCACATTTCTTCTTCCCGTTTGGACCCTTGCGTTTCCTGTTTCATCCGAGCACTCCCACATTTCTTCTTCCCGTTTGGACCCTTGCGTTTCCTGTTTCATCCGAGCACTCCCACATTTCTTCTTCACGTTTGGACCCTTGCGTTTCCTCTTTCATCCGAGCACTCCTACATTCTTCTTCCCATATCGAAATATTATCTTTTTTTTCCAAATTTACGAGGGACTCCTCTTCTTCCTCCTCTTCGCCTGAGGCGGAGGGTCCAAATACAGGGGTTTTGGTGATGGAAGATGAAGCTTCAGAGTTCAGAGTACCGCCATTTCCTCAAAACAACCTACTGGAGCTTCGATATTTGAAAGGTACTGCTGCAGATAGACGAAGGCACTACCATCACACCGATTACTTTTACGCAATGTTACTTCCAGTTCTGAATCAGCCTTCCGATTCCAACCAATATTACGTCATCAATTCCCGTGGCAAAACTAAAGGGTTAGCATGCACAAGTTCAAAGGAAGACGACATGACCAGCTGTTGTTGCTTTAACCTAATTGAGGATATACCACCACAACTCTTCGACCCAGAAAATCCTTATCAACAATTTCAAATTACCAATAAATATACATACTTTGGAAGTCCCTACAGTTTTGTGTCTAAGTCAATGGCTCCTGATGGGGTTCCTCCATATTTCCTGAGACACCAGGGTTGGACAGCTGATACCAAGACTCTTGAAAACTTTGACGCCACACCAGCGCTCGGTGTCGATGTTGCTCTACGAGCTCGTCTCCCTGAGCTCGACTCGAAAGACCAGCCAGTGATGGTGGGAAAATGGTATTGCCCTTTTATTTTCATTCGAGATGGAGAGGTTGGAGCCCAAATGAGGGACTCGGTGTACTACCAAATGACCCTCCAACAGAATTGGGAAGAGATATTTGAATGCTACAATAAAAATGACGACCACAATGTGGCGGTGGATGTTTGTGTTAAGAGGGAGGCGGTTTTAGTTAGAGGGGCATTGTTGGCGGGGGAGAGGGTGGTGGTTTCCGATGGGTTTATGTGGTTTTGTGCGTCGTCCGAGGTGGGGTTGAGCATGGCGATTGTGGAGGAGGAGAGAGTTGGGTTTGTATGGGGGGGAAATCATGAGGAGGAGATTGAGAGAGTTGTGAGAAGAGAAGAGTTTGAAGGAAAGGGAGTATGGAAGAGATTTAGGTGTTATGTTTTGGTTGAAAGGAAGCAGCCAAGTTCTTTCTCCGGATGCTATCCAACTACGAATCAACGAAATAAACCAGACTCTCCGTCGTTGTTGTCGATGCCGCCGCCGAAGGGTCCGAATTCGGGGATTTTAGTGATTCAAGATCAGGAAGAAGATGCAGAATTGAGAAGCAGTCGGTGGTGTGGAATGTTTAAGAAGAAGGAATCAGTGAAGAAGTTGCCGTTCCCTCAGAACAAGATACTGCAGCTGACACATGCGGTGGAAGCAGGAGAGTTTGAGTATTCAGAATCGGTATACGCAGTGGTCATTCCAGTTCTGAATCAGCCCCTCTCTTCCAACCAATATTATATCATCAACGCTCGCGGCACTCGGAAAGGGCTAGCATGCACCAGTTCCAAGGAAGAGGAGACAAGCAGCAAGTGCTGCTACACTGTCCCTGATCCACCACCACAACTCTTCGACCCAAAAAACGAATACCAACAGTTCCAAATCAGTGATTACATATACTGTGGAGGAGCCACTGGTTTCGTGTCCAACTCCATGGCTCCAGACGGGGTTCCTCCACTACGCCTAAGCCGCAATGGGTGGCGAGCTTATAGCCAACCTCTCAACAACTTCCTCGAGCCCACCCAAGCCCTCGGTCTCAATGCCTCACTCCGAGCCTGCCTCCCAGACCTCGACTTCTCGCTCCCCTGCAAATCCTCTAACCCAGTGACTATAGGGAAGTGGTACTGCCCTTTCATTTTCATTCGCGAAGGAAATCAGGCCGTTGGATCTCAAATGACCAACTCACCGTATTACGAAATTACCCTCCATCAAAATTGGGTTGAGATATTCAGCTGCGAAAATAATGGTGCGGCTACTGGTAATGTGGATGTTTTTGTGGAAAGGGAAGTTGTTTCGGGTGAGATGGCGACGACAACAGTGAGTAGAAATGTTGGTGATGGGGTTGCGTGGTTTGAGCCATGGAAGGTTGGGTTGAGCTTGGTGATTGTGGAGAGGATGAAATGGGAAGAGGAAAGAGGGGGGTTTCAATGGGTGGAAGAAGGGGATGAAACGAAAGTGAGGGTAGTGAAGGGAAAACAGGAGTTGAAGTTTAAGGAAATGGGTAATAAGTGGAAAAGATTTGGATGTTATGTGTTGGTGGAGAGACTCGGAAGCAAGCAAGCGAGTAAAGTCAGTCGCAGAGCCGACCAAAGTGAACTCCGAAACGGCGGTACAAACTCCGAAGGCTTTGCTCGGCGCTCGACGATGGCGAATGTGATTGATCAGGATCAACAATGGCTTATCAATTGCTTGTCGGCCACTCTCGACCCTAACCAGGAGGTTCGCTCATTTGCAGAAGCATCGCTAAATCAGGCATCTCTTCAACCAGGTTTTGGGCTTGCATTATCCAAAGTTGCTGCCAACAGGGAGCTTCCTGTAGGATTGCGCCAGATATCCTTTGTTGTCATTGCTATTAAGATTCTTCGTTTTTCTGTGTTATTTGCTTCTCGTTTCCTTTTCTCTGCTGTCCTTCTAAAGCAGTTCATCAAGAAACACTGGCAGGAGGGTGATGAATTATTTGAACATCCTGCGGTTTCTAATGACGAGAAGGCAGTCATTCGCAAGCTTCTTCTATTTACGTTGGATGATTCCCATAGAAAAATTTGTACAGCAATTAGTATGGCTGTGACATCAATCGCAACATATGATTGGCCGGAGGAATGGCCTGAGCTATTGCCTTACCTCTTAGATTTGATGAATAATCGAACTAATATGAATGGTGTGCATGGAGGTCTAAGGTGCTTGGCTCTACTCTCTGGGGAATTGGACTGTGAAATGATTCCAAAACTAGTACCTGCTCTGTTCCCACACTTGCTTTCAATCGTTTCATCTCCAGAGATGTATGACAAGTATTTGCGGACGAAGGCCCTGTCAGTTGTTTATTCTTGTATATCCATGCTAGGGGTGATGAGTGGTGTGTATAAGGAAGAAACCAGTGCGTTGGTAATACCCATGCTAAAACCATGGATGGAACAATTCTCTATTATATTAGGTCATCCGGTGCAGTCTGAAGATCCCGATGACTGGAGCATAAGAATGGAGGTCTTAAAGTGCATGAATCAGTTCTTTCAGAATTTCCCTAGTTTTGCAGAAAGTGATGTCACAATTATTTTGCAATCAGTGTGGCAGACGTTTGTGTCATCTCTCGAAGTATATGTACGATCATCCATTGCAGGTGTAGAAGACCCATATGAAGGAAGCTATGATTCGGATGGTGCTGACAAAAGCCTTGATTCTTTTGTCATCCAGTTGTTCGAATTTCTTTTAACAATAGTTGGAAGTTCAAAACTGGTGAAGCTTGTGAAGAACAATCTAGGGGAGCTGGTATATTACACAATTGCTTTTCTACAAATTACGGAGCAACAGATTCATTTGTGGTCAATGGATTCCAATCAATTTGTTGCAGACGAGGATGATGGCACCTTTAGCTGTCGTGTTTCAGGTGCACTGTTACTTGAAGAAATTGTTGGTAATTGTGGTCTAGATGGAATCAATGCCATCATAGATGCTGCCAAAAGTCGCTTCAGTGAGTCAAAAAGAGAAAAAGCTTCTGGTTCTTCAGTTTGGTGGAGAATCAGGGAAGCTATTCTATTCGCTTTAGCTTCTTTGGCAGAACAGTTGATTGAAGTGGAGCCTTCTGGAGTGACAAGAGTTGGCTTGGAAAGTTTTTTGGAAGAAGTATTGACTGAAGACATGTCTATAGGTCCTCATGAATGTCCCTTCCTTTATGCTCGTATATTCACGTCAGTTGCCAAGTTCTCCTCTATGATTAGGCGTGACCTTATTCATCAGTTCCTTCACGAAGCTGTGAAGGCTCTTGGCATGGATGTGCCACCTCCTGTGAAAGTTGGTGCCTGCAGGGCACTTTCTGAGCTCCTACCTGAAGCAAACAAAGAAATTGTTGGGTCTGAAATGATGTTTTTGTTTTCATCACTTGGAAATCTTCTCAATGGGGCATCAGATGAAACTTTGCACTTGGTACTTGACACCTTGCAAGCTGCAGTTAAGGCCGGTGGTGAATTGTCCGCTTCAATAGAGCCCATTCTCTCTCCTGTGATTCTTAAAATGTGGGCATCGCATGTCTCTGATCCTTTTATCAGCATTGATTTGATTGAGGTTCTCGAGGCAATAAAAAATTCTCCAGGTTGTATCCGCTCGTTAGCTTCACGAATTTTGCCATATTTAGTGCCTATACTAGACAAACCCCAACATCAGCCGGATGGGTTAGTACCTGGATCATTAGATCTGTTGACAATGCTTTTGAAGAATGCTCCAATAGATGTTGTGAAAGCAGCGTATGATGCTTGTTTTGATGGCGTTGTCAGGATAATCCTTCAAACTGATGATCATAGCGAATTGCAGAATGCTACAGAATCTCTAGCAGCTTTTGTAGCAGGGGGGAAGCAAGAAATTCTTACTTGGGGTTCTGGATTTATAATGAAAAGTTTGCTTGCTGCAGCTTCGAG 5168 46.09 MAGSYALLTRPLLETPLPVRLAYPRVETFTEIPSSTGPVPSLQRIRRRSRRVVAEIPPQVPSRRRIDSLPPLQLPSPVTYGRGLNSRPCLFKFRRVPSSSHYFFFLQFLAFTLSSEAPSTPTLRFPFASEHSHISSSRLDPCVSCFIRALPHFFFPFGPLRFLFHPSTPTFLLPVWTLAFPVSSEHSHISSSRLDPCVSSFIRALLHSSSHIEILSFFSKFTRDSSSSSSSPEAEGPNTGVLVMEDEASEFRVPPFPQNNLLELRYLKGTAADRRRHYHHTDYFYAMLLPVLNQPSDSNQYYVINSRGKTKGLACTSSKEDDMTSCCCFNLIEDIPPQLFDPENPYQQFQITNKYTYFGSPYSFVSKSMAPDGVPPYFLRHQGWTADTKTLENFDATPALGVDVALRARLPELDSKDQPVMVGKWYCPFIFIRDGEVGAQMRDSVYYQMTLQQNWEEIFECYNKNDDHNVAVDVCVKREAVLVRGALLAGERVVVSDGFMWFCASSEVGLSMAIVEEERVGFVWGGNHEEEIERVVRREEFEGKGVWKRFRCYVLVERKQPSSFSGCYPTTNQRNKPDSPSLLSMPPPKGPNSGILVIQDQEEDAELRSSRWCGMFKKKESVKKLPFPQNKILQLTHAVEAGEFEYSESVYAVVIPVLNQPLSSNQYYIINARGTRKGLACTSSKEEETSSKCCYTVPDPPPQLFDPKNEYQQFQISDYIYCGGATGFVSNSMAPDGVPPLRLSRNGWRAYSQPLNNFLEPTQALGLNASLRACLPDLDFSLPCKSSNPVTIGKWYCPFIFIREGNQAVGSQMTNSPYYEITLHQNWVEIFSCENNGAATGNVDVFVEREVVSGEMATTTVSRNVGDGVAWFEPWKVGLSLVIVERMKWEEERGGFQWVEEGDETKVRVVKGKQELKFKEMGNKWKRFGCYVLVERLGSKQASKVSRRADQSELRNGGTNSEGFARRSTMANVIDQDQQWLINCLSATLDPNQEVRSFAEASLNQASLQPGFGLALSKVAANRELPVGLRQISFVVIAIKILRFSVLFASRFLFSAVLLKQFIKKHWQEGDELFEHPAVSNDEKAVIRKLLLFTLDDSHRKICTAISMAVTSIATYDWPEEWPELLPYLLDLMNNRTNMNGVHGGLRCLALLSGELDCEMIPKLVPALFPHLLSIVSSPEMYDKYLRTKALSVVYSCISMLGVMSGVYKEETSALVIPMLKPWMEQFSIILGHPVQSEDPDDWSIRMEVLKCMNQFFQNFPSFAESDVTIILQSVWQTFVSSLEVYVRSSIAGVEDPYEGSYDSDGADKSLDSFVIQLFEFLLTIVGSSKLVKLVKNNLGELVYYTIAFLQITEQQIHLWSMDSNQFVADEDDGTFSCRVSGALLLEEIVGNCGLDGINAIIDAAKSRFSESKREKASGSSVWWRIREAILFALASLAEQLIEVEPSGVTRVGLESFLEEVLTEDMSIGPHECPFLYARIFTSVAKFSSMIRRDLIHQFLHEAVKALGMDVPPPVKVGACRALSELLPEANKEIVGSEMMFLFSSLGNLLNGASDETLHLVLDTLQAAVKAGGELSASIEPILSPVILKMWASHVSDPFISIDLIEVLEAIKNSPGCIRSLASRILPYLVPILDKPQHQPDGLVPGSLDLLTMLLKNAPIDVVKAAYDACFDGVVRIILQTDDHSELQNATESLAAFVAGGKQEILTWGSGFIMKSLLAAAS 1722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36360630 36387302 - CrPI670011_05g024950.1 Cre05g2495 499008

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2495 1722 Pfam Protein of unknown function (DUF1262) 590 693 IPR010683 -
Cre05g2495 1722 Pfam Protein of unknown function (DUF1262) 235 327 IPR010683 -
Cre05g2495 1722 SUPERFAMILY ARM repeat 977 1705 IPR016024 -
Cre05g2495 1722 PANTHER IMPORTIN-7, 8, 11 970 1722 - GO:0005635(PANTHER)|GO:0005829(PANTHER)|GO:0006606(PANTHER)
Cre05g2495 1722 MobiDBLite consensus disorder prediction 566 580 - -
Cre05g2495 1722 ProSiteProfiles Importin-beta N-terminal domain profile. 999 1097 IPR001494 GO:0006886(InterPro)|GO:0031267(InterPro)
Cre05g2495 1722 SMART IBN_N_2 999 1097 IPR001494 GO:0006886(InterPro)|GO:0031267(InterPro)
Cre05g2495 1722 MobiDBLite consensus disorder prediction 566 588 - -
Cre05g2495 1722 Pfam Importin-beta N-terminal domain 999 1095 IPR001494 GO:0006886(InterPro)|GO:0031267(InterPro)
Cre05g2495 1722 Gene3D - 976 1721 IPR011989 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2495 K20224 - - csv:101216055 1351.27
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2495 Cre-Chr5:36360630 Cre09g0509 Cre-Chr9:4839071 3.20E-64 dispersed
Cre01g1131 Cre-Chr1:21186593 Cre05g2495 Cre-Chr5:36360630 1.00E-21 transposed
Cre04g2092 Cre-Chr4:38131956 Cre05g2495 Cre-Chr5:36360630 3.00E-45 transposed
Cre05g2527 Cre-Chr5:36605986 Cre05g2495 Cre-Chr5:36360630 3.00E-92 transposed
Cre06g1633 Cre-Chr6:12503102 Cre05g2495 Cre-Chr5:36360630 5.50E-77 transposed
Cre06g2005 Cre-Chr6:27619780 Cre05g2495 Cre-Chr5:36360630 4.20E-74 transposed
Cre06g2344 Cre-Chr6:31375320 Cre05g2495 Cre-Chr5:36360630 1.30E-63 transposed
Cre07g0919 Cre-Chr7:8667523 Cre05g2495 Cre-Chr5:36360630 6.10E-53 transposed
Cre09g1459 Cre-Chr9:28251045 Cre05g2495 Cre-Chr5:36360630 2.20E-72 transposed
Cre11g0613 Cre-Chr11:3248434 Cre05g2495 Cre-Chr5:36360630 5.70E-66 transposed
Cre11g1606 Cre-Chr11:26717379 Cre05g2495 Cre-Chr5:36360630 4.80E-73 transposed
Cre02g2175 Cre-Chr2:35382484 Cre05g2495 Cre-Chr5:36360630 1.80E-51 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g207 . . . . . . Bma14g01684 . Cmo04g01627 Cmo18g01084 . . Car04g01606 . Sed07g1969 . Cpe01g01382 Bhi07g01398 Tan04g0927 Cmetu10g0461 Lac13g0436 Hepe10g1849 . . Cla05g02354 Cam05g2523 Cec05g2551 Cco05g2591 Clacu05g2518 Cmu05g2380 Cre05g2495 . . . . Lsi04g00312 Csa05g02557 Chy10g01097 Cme10g00314 . Blo11g00817 Bda07g01513 . Bpe11g01676 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011083 1 1 1 1 1 1 2 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 2 0 1 1 1 1 1 30