Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre05g2531 | ATGGGGAAAACCGGGGCCAAGTTGCCAAGTTTCTGCCTGAACCGGATCCGGCCTCATGTTCGAGTTCCTATTCAATCCAAACCGGACTCTGTTTCTGTTAAAAGCGGTCCTAACAAGAAGGCTGATGATTCCGTTGATGACATTCAAGTTGGAGCTAAGCCAGTTTTGGGAATTGGAAGGAAGATCATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCATTGGGCTCTCTCTCACACTGTCCAAAATCAAGACAACATTCTTCTTCTTCATCTCACTAAGCCTTCAACAAAAGGAGAAGGACTGAGTAAGGAGACAGCACCAAGAGCTTATGAATTGGTTCATTCCATGAGAACTTTATGCCAATTGAAGAGACCTGAGGTGGAAACGGAAGTTGCGGTGGTGGAAGGAGGGAAGGAGAAAGGGGCAGTGATAGTGGAAGAAGCGAGAAAGCGAGGGGTGTCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCGACGACATGGCGGCTTCTGATGGTGTGGGCAGGCCACCGGTGGGGTGGCGGAGGCGGAGGCGGCGGCGGCGGTGTGGTGGAGTATTGTATACAAAATGCGAGCTGTATGGCGATTGCGGTGAGAAGGAAGAGCAAGAAATTGGGTGGTTATTTGATCACTACAAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA | 699 | 49.36 | MGKTGAKLPSFCLNRIRPHVRVPIQSKPDSVSVKSGPNKKADDSVDDIQVGAKPVLGIGRKIMIVVDSTIEAEGALHWALSHTVQNQDNILLLHLTKPSTKGEGLSKETAPRAYELVHSMRTLCQLKRPEVETEVAVVEGGKEKGAVIVEEARKRGVSLLVLGQKKRSTTWRLLMVWAGHRWGGGGGGGGGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 36628326 | 36629201 | - | CrPI670011_05g025310.1 | Cre05g2531 | 499044 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre05g2531 | 232 | Gene3D | HUPs | 59 | 216 | IPR014729 | - | |
| Cre05g2531 | 232 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 60 | 212 | - | - | |
| Cre05g2531 | 232 | MobiDBLite | consensus disorder prediction | 24 | 45 | - | - | |
| Cre05g2531 | 232 | Pfam | Universal stress protein family | 60 | 209 | IPR006016 | - | |
| Cre05g2531 | 232 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 1 | 232 | - | - | |
| Cre05g2531 | 232 | CDD | USP_Like | 61 | 208 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g2531 | Cre-Chr5:36628326 | Cre11g1983 | Cre-Chr11:31591580 | 3.00E-21 | dispersed | |
| Cre01g1495 | Cre-Chr1:28181512 | Cre05g2531 | Cre-Chr5:36628326 | 6.60E-42 | wgd | |
| Cre05g2531 | Cre-Chr5:36628326 | Cre06g2408 | Cre-Chr6:31973723 | 9.80E-49 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre05g2531 | - | - | - | 0.0 |