Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre05g2534 | ATGGGAAAGCTCTGTGAAGCTCCTTACAACAAGACTGTCGACTGGGCCAAGTGGTATATATTTTGGGCTGATGAACGTGTTGTTGCAAAAAGCCATGCGGACAGCAATTATAAGCTTGCAAAGGATAACCTTCTTTCCAAGGTGCCAATTGTTCCCAGCCATGTACACTCGATCAATGATTCGGTGTCAGCTGAGGAAGCTGCCGATGAGTACAAGTTCGTCCTTCGACAATTAGTTAAATCCCGCATCGTAAGTGTGTCTGATGTGAGTGACAGTCCCAAGTTTGACCTCATACTACTTGGAATGGGTTCTGATGGCCATGTTGCCTCATTATTCCCCAATCACTCTGTGGTCGAGGAGAAAGATGAATGGGTTGCCTTCATAACCGATTCTCCGAAACCTCCTCCAGAGAGAATCACCTTCACATTGCCTGTGATCAACTCTGCATCAAATGTGGCGATTGTTGTGACAGGCGAAAACAAAGCAGAGGCTGTACATTTGGCCATCGATGATGTAGGAGCAGACTGCCCACTCCTACCTGCGAGGCTTGAGGCATTTGCTTGGCCTTGGAAATGGAAACCCAAATCCAGTTTCCGATTACATTTGCCTCGTGAGAGAAGATTCCCTTCAATGTTTCATCATTTCATTAATATGAAAATTGCATCGCATTCAACGAGTTGTAGGCCTCAGCTCCATCATTTCATCGCGCAGAAGATGTCGACATTCGAGTTGTCGATGACGTTCACTTACGATGTCTGA | 759 | 45.98 | MGKLCEAPYNKTVDWAKWYIFWADERVVAKSHADSNYKLAKDNLLSKVPIVPSHVHSINDSVSAEEAADEYKFVLRQLVKSRIVSVSDVSDSPKFDLILLGMGSDGHVASLFPNHSVVEEKDEWVAFITDSPKPPPERITFTLPVINSASNVAIVVTGENKAEAVHLAIDDVGADCPLLPARLEAFAWPWKWKPKSSFRLHLPRERRFPSMFHHFINMKIASHSTSCRPQLHHFIAQKMSTFELSMTFTYDV | 252 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 36657101 | 36661032 | - | CrPI670011_05g025340.1 | Cre05g2534 | 499047 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre05g2534 | 252 | NCBIfam | 6-phosphogluconolactonase | 10 | 181 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Cre05g2534 | 252 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 3 | 182 | IPR037171 | - | |
| Cre05g2534 | 252 | CDD | 6PGL | 11 | 183 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Cre05g2534 | 252 | Pfam | Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase | 4 | 177 | IPR006148 | GO:0005975(InterPro) | |
| Cre05g2534 | 252 | Gene3D | - | 1 | 185 | - | - | |
| Cre05g2534 | 252 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 2 | 184 | IPR039104 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g2534 | Cre-Chr5:36657101 | Cre09g2487 | Cre-Chr9:44150260 | 9.60E-58 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre05g2534 | K01057 | - | csv:101210739 | 344.739 |