Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2539 ATGGCAGCGACGGGTAGACGTGAAAGAAGTTCACATTCAACAGAACAGCCAGATATAATAAAGTTGGGTACTAGTATACATTCTGAAGGTACTGGTGCGGAAGGCGTTTCACTTTCCCCGACGGAACAGCTAGGATATGGGTCTTCATCGTCTATAAATTTGTTGGAAATATCGGATCTCGCACAAGTTGGCGCAAATGTTAACCGATCTGAAGCAGAGACGATTTGCTTGGGAAATCCCGGTCGTGGTATTTACCAGCTTCAATTTAAAGATGATGATAGCGATGTTTCCAGCGTTTCTTCTGCCAAATCAGAGAAGAGTAGCGGTTCTCAAGGTCCCACATCTGTATCCCAAGTGTCAGATTTTACCCTTGAGTTTGGTGGAAATATTATGTCTCCAACTCAATCCCCTCCTCTTCAGACGATGGATCGTGTGGGAGGATATGAATCATATGATCCGTTTAGAATCCCATCTGCAGTTTTCCAAAAAAGTAGATCAATCACTCCATTGGAATGGAGTATTGCTTCAAATGAGTCCTTGTTTAGCATTCAGGTCGGAAACAATAGTTTCTCCAGAGATCATGTGTTGATGTTGAGTGAGTTGGGTAAGTCTGGTGAGTTGACAAAATCAGGCGAGTTGTTTGTGTTTAGCCCACCATCTGCAGTTATCACGTCAGGAGAAACTGAAATAGCTGAATACGAAGAGGAGCCGAAAATGGCAGATACCATAGAATATAACACAAAGGATAAGGAGGGTTTGATTGCAGAAGATCTAAGTGACAGAAACCTACCGCCTCCTGCAGTATCATGGAATTCCTCTAGCAAATCTCGCCACTCTGATAGAAGTCAAAGCAGCTCAGATTCATTCGCTTTCCCCATAAAGAAGAACCACGTTGCTACCCTACATGGTCAAGCTGCTGTTGCTGGAACTGTAGCAGGATGTTCTGCTATTGTTGGAACTGTAGCCGAAGAGGATTTTGTTGTCACACCTCTAACATGTCGAATGTCTCTTGATCAGATCATTCTCATCTGGAACTTCGTTAATGTTGTCAAAAGAAAGTACAAGCATCAAACTAACCAGTACACAATGACTGCAGTTTGGCCGATGAAGAGGCACAGGGTGGATCCATGGCTGTGGATGTCAAATTTCAAGGCACTCCAGCCTCTTCAAAATCAACAGCGAAGTGTTGGTTTCCCTGCTGTTCGTGTTCTTGTTTCAAATGGAGTTGCTGTTCCTGTTCCTCTTGTTTCAAATGGAGTTGCTGTTCATGTTCTTCTTGTTTCAAATGGAGTTTCTGTTCATGTTGTTCTTGTTACAAATGGAGTTGTTGTTCATGTCCTTGTTACAAGCGGAGTTGCTGTTCATTTTTTTCTTGCGACAAGTGTAGTTGCTGTTCATGTTCTTCTTGTTGGAGGTGGAGTTGGAGGTGGAGTTGCAGTTCATGTTCTTGTTGCAAATGGAGTTGTGGTTCATGTTCTTCTTGTTGCAAATGGAATTTCTGTTCATGTTCATCTTGTTGGACATGGACCTGCTGCAGTAGTTGTCATTTTAATCATTGTTGCCATTTTCGTCCTCGCTGTTGTTTTCGTCCTCGTTGTCATATTTACCCTTCTTGTCATTTTTGTCATTGTTGTTAAACAGACATTGTCGCAGGGAAGACACTGTCGCCTAACCTTTTATACTAACCTCTTTAGGCATTTAGAAATAGGGTGA 1713 42.5 MAATGRRERSSHSTEQPDIIKLGTSIHSEGTGAEGVSLSPTEQLGYGSSSSINLLEISDLAQVGANVNRSEAETICLGNPGRGIYQLQFKDDDSDVSSVSSAKSEKSSGSQGPTSVSQVSDFTLEFGGNIMSPTQSPPLQTMDRVGGYESYDPFRIPSAVFQKSRSITPLEWSIASNESLFSIQVGNNSFSRDHVLMLSELGKSGELTKSGELFVFSPPSAVITSGETEIAEYEEEPKMADTIEYNTKDKEGLIAEDLSDRNLPPPAVSWNSSSKSRHSDRSQSSSDSFAFPIKKNHVATLHGQAAVAGTVAGCSAIVGTVAEEDFVVTPLTCRMSLDQIILIWNFVNVVKRKYKHQTNQYTMTAVWPMKRHRVDPWLWMSNFKALQPLQNQQRSVGFPAVRVLVSNGVAVPVPLVSNGVAVHVLLVSNGVSVHVVLVTNGVVVHVLVTSGVAVHFFLATSVVAVHVLLVGGGVGGGVAVHVLVANGVVVHVLLVANGISVHVHLVGHGPAAVVVILIIVAIFVLAVVFVLVVIFTLLVIFVIVVKQTLSQGRHCRLTFYTNLFRHLEIG 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36700631 36702939 - CrPI670011_05g025390.1 Cre05g2539 499052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2539 570 MobiDBLite consensus disorder prediction 1 15 - -
Cre05g2539 570 MobiDBLite consensus disorder prediction 1 47 - -
Cre05g2539 570 MobiDBLite consensus disorder prediction 256 287 - -
Cre05g2539 570 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 88 293 - -
Cre05g2539 570 MobiDBLite consensus disorder prediction 265 287 - -
Cre05g2539 570 MobiDBLite consensus disorder prediction 30 47 - -
Cre05g2539 570 MobiDBLite consensus disorder prediction 95 117 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre11g0963 Cre-Chr11:6916220 Cre05g2539 Cre-Chr5:36700631 6.70E-10 wgd
Cre05g2539 Cre-Chr5:36700631 Cre06g2423 Cre-Chr6:32123644 1.10E-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2539 - - - 0.0