Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2542 ATGATGGCCATTTGTGAGGGATTGGATTGTTTCCTTTCTGCTACTGTGGGGAACATTTGCATGGAATCTGATGGCTTGGAGGTTGTCAAACTCTTCAACAGAGTCGATGCGGATTTTTCTGAGGTATCTTTCTTCATTGAGGAAGCTTATTTGATCGCCCTATATCTGGAAGCAATTTCCTTCTCCACATCAATAGAAATCCAAGTATCAGCAAACACTTTGTTGTTCAAATCTAGTGGGCATTGTCAATTTGGAAATAGCTCACCAGATAGACCAAATTTTATCCCACAGCTTTCTCAGGTGCAGGATAATTGGACTTCTGTTATATTTGCTATGGCTGGTGGTGCAGCGCTGAGTATTGGGAATCTTTCTTCTCAATATGCTTTGGCATTTGTTGGTTTGTCAGTTACAGAAGTGCTCAATTGTAGCATAATAGTAGTTTTAGGCTCAACCATGAACTATTTTCTTGATGGCAAAATTAATAGAGCGGAGATTCTTTTCCCCGGCATTGCTTGCTTTTTGATTGCGGTTTGTCTTGGCTCTGCTGTTCACTTATCCAACACAGCTGATGACAAAATAAAGTTGGAAAGCTTGTCCATCTATTCAAAAAAGGAGTCCAAGGCAATTGCTGTCTCTCCAATATCAGTTGAATCAGCGGACCTGGAGAATGCCGATTGTTCCTCGCGAAATGCAGAAGCTGGAACTGCAGACTTTCTTGTTCAAGTTGAAAACAGAAGGTCCATCAAGGTGTCTGGTAAGAGCACACTAGTTGGACTGTGCATAATTTTCTTTGCTGGTGTTTCCCTTTCACTCTTCTCACCTGCATTCAATTTGGCTACAAATGATCAATGGCACACTCTAAAGGAAGGCATCCCACACTTGTCTGTCTATACTGCATTTTTCTACTTCTCGACCTCTTTTTTCGTCTTGGCCTTCGTTCTTAACATCATCCTCCTTTACCGCCCTATACTGAACTTACCCAAAACATCATTCAAGGTTTATCTGAATGATTGGGATGGTAGAGGATGGGCCTTTTTGGCTGGATTTTTGTGTGGATTTGGCAATGGTTTGGAGTTCATGGGTGGTCAAGCTGCTGGATATGCAGCAGCAGATTCTGTGGAGGCATTTCCACTGGTGAGCACGATTTGGGGTGTTGTTCTGTTTGGAGAATACCGAAGATCGTCAAGAAAAACTCACGTTCTGCTAGTGAGCATGTTGTTTATGTTCACAGTAGCTGTTGTTGTTCTAATGGCTTCATCAGGACATAGACTTGAGCCAGGTGTTCGAAAATCATTGGGGAAATCTTGTAAAAGCTTAACCCTTTGTGCATTTGATTGGAAGAGGGTTGCTTATAATCGTCATCATCAGGATTTCTTTGCCATTTCATAA 1389 41.83 MMAICEGLDCFLSATVGNICMESDGLEVVKLFNRVDADFSEVSFFIEEAYLIALYLEAISFSTSIEIQVSANTLLFKSSGHCQFGNSSPDRPNFIPQLSQVQDNWTSVIFAMAGGAALSIGNLSSQYALAFVGLSVTEVLNCSIIVVLGSTMNYFLDGKINRAEILFPGIACFLIAVCLGSAVHLSNTADDKIKLESLSIYSKKESKAIAVSPISVESADLENADCSSRNAEAGTADFLVQVENRRSIKVSGKSTLVGLCIIFFAGVSLSLFSPAFNLATNDQWHTLKEGIPHLSVYTAFFYFSTSFFVLAFVLNIILLYRPILNLPKTSFKVYLNDWDGRGWAFLAGFLCGFGNGLEFMGGQAAGYAAADSVEAFPLVSTIWGVVLFGEYRRSSRKTHVLLVSMLFMFTVAVVVLMASSGHRLEPGVRKSLGKSCKSLTLCAFDWKRVAYNRHHQDFFAIS 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36712905 36720323 - CrPI670011_05g025420.1 Cre05g2542 499055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2542 462 Pfam Ureide permease 82 419 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
Cre05g2542 462 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 82 423 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0071705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2542 Cre-Chr5:36712905 Cre09g0837 Cre-Chr9:8387352 3.70E-140 dispersed
Cre05g2541 Cre-Chr5:36710003 Cre05g2542 Cre-Chr5:36712905 7.90E-139 tandem
Cre05g2542 Cre-Chr5:36712905 Cre05g2543 Cre-Chr5:36720487 2.30E-25 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2542 - - - 0.0