Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2544 ATGGCTGTTCTCGCGTTCTTAGTGTTTGTTCTTGCGCTAACTGGTCGATCTTATGCCAACTATTGCTTGTGTAGAGATGGGGCAACCCAACAAGCCCTTCAGAAGGCACTGGACTATGCTTGTGGAGCTGGAGCTGACTGTTCTCCAATCCTCTCCAATGGCGCTTGTTTTCAGCCCAACACTGTCAAAGATCACTGTAATTACGCTGTCAATAGTTATTTCCAGCGAAAGGGGCAAGTCCAAGGAAGCTGTGACTTTAACGGCGCCGCCACGCCCAGCGTTACCCTTACTGCCTCTGTGCCCTCTGGTTGTGTCTATCCTTCTAGCCCCAGCAATGCGGGAACATCGCCGACGAACTCCGGCGGAACCACACCGACGATGACACCAGGGACGCCGTCGACGACGAATCCAGGAATGACGCCGACGGTGTTCGGAAACGGAATCAGCCCGAGTGGGAGCGGCTCCGGTTTCAACGACGGCAGCGGCGGCGTGGGTTTCAATGAAAAGAGGAACTTGCTTTTGGCAGTGGGCCTAACTCTGTGGCTTTCCGTATTGTTTCTCTGGGGATGA 570 54.21 MAVLAFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSNGACFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNSGGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGGVGFNEKRNLLLAVGLTLWLSVLFLWG 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36726620 36727870 - CrPI670011_05g025440.1 Cre05g2544 499057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2544 189 Pfam X8 domain 21 91 IPR012946 -
Cre05g2544 189 PANTHER BETA-1,3 GLUCANASE 10 109 IPR044788 -
Cre05g2544 189 SMART X8_cls 20 106 IPR012946 -
Cre05g2544 189 MobiDBLite consensus disorder prediction 109 156 - -
Cre05g2544 189 Gene3D - 17 108 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1519 Cre-Chr1:28387818 Cre05g2544 Cre-Chr5:36726620 6.10E-32 wgd
Cre05g2544 Cre-Chr5:36726620 Cre06g2431 Cre-Chr6:32181529 6.50E-35 wgd
Cre05g2544 Cre-Chr5:36726620 Cre08g0976 Cre-Chr8:22899600 3.00E-40 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2544 - - - 0.0