Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2551 ATGGCAGCATTGCGATTATCATCGCCCTGTGTTAATTCTAATAATCCACAATCCCCAAAACTCAAATTCCCATCCACCTTCGCTTCAGAGTCTAGTTTCGGGACCAATTGGACGAGGCTTCTGTTGTCCAGAGCTTCGTTCTGGAGTTCTTCAAGAAGGAAGCTGTGCATTAGAAACGTAGCCAGCGATCGACAGAAACAACTGAAGGAGCCGGTCAACGGAGAAGTTGTAGACGACTTCGATAGCTTTCTTCCAGATTCGGCGTCCATTGCTGCAAGTATTAAGTACCATTCGGAATTCACGCCTTCTTTCTCACCGGAGGGCTTTGGGCTTTCTAAGGCATACTATGCAACTGCTGAAAGTGTTCGTGATATGCTTATCATCAACTGGAATGCTACGTATGAGTACTATGAAAAGATGAATGTGAAGCAGGCCTACTATCTGTCGATGGAGTTTTTACAGGGTAGGGCATTGCTAAATGCAATTGGAAATCTGGAACTATCAGGAATTTATGCAGATGCTTTAAGAGTGTTAGGATGTAATCTCGAGGAGGTAGCACGGCAGGAATCGGATGCTGCACTAGGAAATGGAGGATTAGGGCGGCTTGCTTCCTGCTTTCTGGACTCCCTGGCAACACTAAACTATCCAGCATGGGGATATGGACTGAGATACAAGTATGGTTTGTTCAAACAGCTTATTACAAAAGATGGACAGGAGGAAGTGGCCGAAAATTGGCTAGAGATGGGCAATCCCTGGGAAATTGCAAGACACGACATCTCCTATCCTGTGAAATTCTATGGTGAAGTCATTTCAGGCGCAGATGGAAGCAAGCAATGGGTTGGAGGAGAAAATATCACTGCTGTTGCCTATGATGTCCCAATACCAGGTTATAAAACTAAAACCACGATAAACCTCCGTTTGTGGTCCACAAAGGTTGCTCCCGAACAATTTAATTTGAGTTCTTTCAATGTTGGAGATCATGCCAATGCATATGCAGCCATAAAGAAAGCTGAAAAGATCTGTTACGTACTGTACCCTGGAGACGAGTCACTGGAGGGAAAGACTCTTAGACTGAAACAGCAATACACATTGTGCTCTGCTTCCCTTCAAGATATTGTCGCACGTTTTGAGAGGAGATCTGGGGAGACTGTGGACTGGGAAAATTTTCCAGAAAAGGTTGCTGTGCAGATGAATGATACCCATCCTACACTTTGTATCCCTGAGCTGATAAGAATATTGATGGATGTGAAAGGGTTAACCTGGAAAGAAGCTTGGGACATCACTCGTAGAACTGTAGCCTACACAAATCATACAGTTCTGCCGGAGGCGCTGGAAAAATGGGGTTTCCCCCTCATGCAGGAACTACTTCCTCGACATGTTCAGATAATTGAAATGATTGACGAGGAGCTTATCCATTCCATCATTGCTAAGTACGGTACAAAAGATCTTGAGTTGTTGCAGCAAAAGCTGAAGCAAATGAGAGTTCTAGAAAATTTTGAATTACCAGACTCGGTAATGGAACTTCTAGTAAATTCAGTGGAGTCTGTGGTAGCAGTTGATCTCGTTGAGGAAGCTGAAATTCTGGATGAGGAATCATTACCTGGTAAAGAAGTAGACGAGAATGAAGACAAAAGTATTGCGAAGAAAATAGATATTTCATTTAAAGTTGATCCAAAGCATCCAAAGATGATTCGCATGGCTAATTTGTCTGTTGTTGGTGGATATGCTGTAAATGGTGTTGCTGAAATTCATAGTGAAATTGTTAGAACTGAAGTTTTTAGCGACTTTTATGAGTTGTGGCCTAAGAAATTTCAAAACAAAACGAACGGAGTGACACCGAGAAGATGGCTCCGTTTTTGCAATCCGGACCTGAGTAAAATCATCACGAAGTGGACTGGAACAGAGCACTGGGTGACAGATACTGAAAAACTGGCAATACTCCGAGAGTTCACTGATAACGAGGATCTCCAGTCCATGTGGGAGGAAGCTAAAAGAATAAACAAATTGAAAGTTGTCTCTTTTCTTAAAGAAAAAACTGGCTATTTAGTCAGCCCTGATGCAATGTTTGACGTACAGGTAAAACGCATCCATGAATACAAGCGGCAGTTGTTGAACATCCTGGGGATCGTTTATCGTTATAAACAAATGAAAGAAATGACTCAAGAGGAAAGAGAAGCCAAGTTTGTTCCTCGAGTTTGTATATTTGGCGGGAAAGCATTTGCTACATATGTCCAGGCCAAAAGGATTGTGAAATTCATTGTTGATGTTGGAGCTACCGTCAATAACGATCCTGATATAGGAGATCTTTTGAAGGTAGTCTTTGTTCCAGATTACAATGTGAGTGTAGCAGAAGTGCTCATTCCTGGCAGTGATCTTTCCCAGCATATCAGCACGGCTGGAATGGAGGCCAGTGGTACCAGCAACATGAAGTTTGCAATGAATGGCTGTGTACTAATTGGAACATTAGATGGGGCAAATGTAGAGATAAGAGAAGAAGTTGGAGAAGACAACTTTTTCCTCTTTGGTGCAAGGGCTCATGAAATTGCTGGCCTAAGAAAAGAAAGAGCTGAAGGCAAGTTTGTTCCTGACGCACGGTTTGAGGAAGTGAAGGCCTTCGTAAGAAGTGGGGTTTTTGGTTCCAATAACTATGAAGAACTCATGGGATCTTTAGAAGGAAATGAAGGTTATGGTCGGGCAGACTATTTCCTCGTTGGCAAGGACTTCCCTAGTTACATAGAGTGCCAAGACAGGGTTGATGAGGCCTATCGAGATCAAAAGAGATGGACCAAGATGTCGATCTTAAACACAGCTGGTTCATTCAAGTTCAGCAGTGACAGAACCATTCATGAGATCATTCCTAGGAGTCACTTAAATTCTCGAGTGAATTCAACTAAGAATCACTGCAATCCGACCTAG 2916 42.83 MAALRLSSPCVNSNNPQSPKLKFPSTFASESSFGTNWTRLLLSRASFWSSSRRKLCIRNVASDRQKQLKEPVNGEVVDDFDSFLPDSASIAASIKYHSEFTPSFSPEGFGLSKAYYATAESVRDMLIINWNATYEYYEKMNVKQAYYLSMEFLQGRALLNAIGNLELSGIYADALRVLGCNLEEVARQESDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKDGQEEVAENWLEMGNPWEIARHDISYPVKFYGEVISGADGSKQWVGGENITAVAYDVPIPGYKTKTTINLRLWSTKVAPEQFNLSSFNVGDHANAYAAIKKAEKICYVLYPGDESLEGKTLRLKQQYTLCSASLQDIVARFERRSGETVDWENFPEKVAVQMNDTHPTLCIPELIRILMDVKGLTWKEAWDITRRTVAYTNHTVLPEALEKWGFPLMQELLPRHVQIIEMIDEELIHSIIAKYGTKDLELLQQKLKQMRVLENFELPDSVMELLVNSVESVVAVDLVEEAEILDEESLPGKEVDENEDKSIAKKIDISFKVDPKHPKMIRMANLSVVGGYAVNGVAEIHSEIVRTEVFSDFYELWPKKFQNKTNGVTPRRWLRFCNPDLSKIITKWTGTEHWVTDTEKLAILREFTDNEDLQSMWEEAKRINKLKVVSFLKEKTGYLVSPDAMFDVQVKRIHEYKRQLLNILGIVYRYKQMKEMTQEEREAKFVPRVCIFGGKAFATYVQAKRIVKFIVDVGATVNNDPDIGDLLKVVFVPDYNVSVAEVLIPGSDLSQHISTAGMEASGTSNMKFAMNGCVLIGTLDGANVEIREEVGEDNFFLFGARAHEIAGLRKERAEGKFVPDARFEEVKAFVRSGVFGSNNYEELMGSLEGNEGYGRADYFLVGKDFPSYIECQDRVDEAYRDQKRWTKMSILNTAGSFKFSSDRTIHEIIPRSHLNSRVNSTKNHCNPT 971
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36777770 36784161 - CrPI670011_05g025510.1 Cre05g2551 499064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2551 971 Gene3D Glycogen Phosphorylase B; 80 613 - -
Cre05g2551 971 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 802 814 IPR035090 -
Cre05g2551 971 Pfam Carbohydrate phosphorylase 177 497 IPR000811 GO:0005975(InterPro)|GO:0008184(InterPro)
Cre05g2551 971 Pfam Carbohydrate phosphorylase 550 950 IPR000811 GO:0005975(InterPro)|GO:0008184(InterPro)
Cre05g2551 971 PANTHER GLYCOGEN PHOSPHORYLASE 64 950 IPR000811 GO:0005737(PANTHER)|GO:0005975(InterPro)|GO:0005980(PANTHER)|GO:0008184(PANTHER)|GO:0008184(InterPro)|GO:0030170(PANTHER)
Cre05g2551 971 FunFam Alpha-1,4 glucan phosphorylase 611 943 - -
Cre05g2551 971 Gene3D Glycogen Phosphorylase B; 614 943 - -
Cre05g2551 971 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 85 950 - -
Cre05g2551 971 CDD GT35_Glycogen_Phosphorylase 93 950 - -
Cre05g2551 971 PIRSF Glucan_phosphorylase_GlgP 105 969 IPR000811 GO:0005975(InterPro)|GO:0008184(InterPro)
Cre05g2551 971 FunFam Alpha-1,4 glucan phosphorylase 84 512 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0923 Cre-Chr3:7961931 Cre05g2551 Cre-Chr5:36777770 2.10E-217 dispersed
Cre05g2551 Cre-Chr5:36777770 Cre07g1090 Cre-Chr7:17858581 9.40E-279 dispersed
Cre05g2551 Cre-Chr5:36777770 Cre02g2283 Cre-Chr2:36399238 8.50E-296 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2551 K00688 - csv:101221746 1740.7