Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2559 ATGTTGACAAATTTCATGTCACTGTTCTTAGAAGGTCGTTCGTTTATGGTTCTTGAGTTTTTCGAATCGGAGGATGTGGGTTTAAGGAATGGGAACAAAGGTGCAAGTGGTCAATACTATAATGGAATTCTGCCAAGAGCTACCTCCGATGCATATCTAGGTTGTGATAGAGATGCTGTGAAGAGGACAATGCTTGAGCATGAAGCCATATTCAAGAACCAGGTTCGTGAGCTGCATCGGTTATATATAAAACAGAGAGAGTTAATGAATGATATTAAAAGATCAGAACACAGACACCCGATACCGGTGGACATATCATTCTCATCTAGTCCTCTAGCATCTCAAAGTACTCCTGATGGTGCAAGGAAATGGCATCTCCCAAGCTTTCCTCTTGCAATTTCTTCCAGTGGACCATCTGTACCTGGTGTTGAAGATGTAAAATCATCTTTAAGTTCTTTGAAAGAAAACAATAGAAGTGATGGCCTCTTACCATCCCAAAATGGAACCAGTTCAAAGGACTGTGAGGTACTAGAATCTAGACCCTCAAAGTCTAGGAGGAAAACTTTTGATCTTCAACTTCCAGCAGATGAGTACATTGATAGCGAAGAGGGGGAGGTATTTCAAGATGAAAAAGTGCCTCCCACGTTGGGTTGCCATTCAAATGGTAACAAGAAATTTGAGACTCAGAGTTGTGTGACGGCAAATTTGAATGTGAATCCTAGTGAAAAAAGTGGTGGCCAAAGTGCTGCTTTGAGAACTGACTCACGTTTATGGAACAGATATGGTTTGGCTGACTTGAATGAGCCTGTTCAGGTCGAAGAGGCAAATGGGTCCAATTTTTTTGATCTTCCTAATGCTCGTGACTCCAGCAATGGGGAGACTCAAGGCCCCATTGTATCGTCTACGAAGCAAGAAATTTTTCTGAGCTCCAATAATGAAGGTGGACATGCAACAAATAGGAATTTGTATATTGAGAATGGAAATAGAAGAGAGGCATTTCCAAACATCTTTGAAGCAGGACGTAGTAAGGAAAGTGAGAAATCTTTTACTCATGGTCAGATGGAAAAATTCCATTTATCTTCTAATCCTATGCAAGTTCCACTTAACAAGTTTCATGAACTTCCAGTTTTCTATCTCAATGATAAAAGCAAGGTTCAACAAGATTTGGACAGGCCAGTTAGTGATTTGCAATTATCCAAAAGAAGTTATGAAATGTCCAATACTGGGGATCCTGGTTATCTTTTAGCTTCTCAGACATCTCGTACATATCAAATTGCTCCTTCTTTGGACGTGGGCAAGTCTTGGGCTCACTCCAGTTCATCTTGGGAAAAGTCAAATGGCAACCGCTCCCAAAAGATGGCATCAGGTCATACACAGCCGTGTTTCAAATCGTCTGCTGCTGTTCACAAGAGTTTTCCTTCATCAGCTCAGAACAATGGAATTTTTGGAGATAGATGGCATTTGAGTAGTGACTCTAGATCAAACCCTGGGTCTGGTTGTGAAACTCCTTACCAGAATGGATTCTATTTTGGGTCTACGTCTGGTTCCAATGGGGGAATTCTCTCCTCTAGCGTAAGGCATGACCATGGGGCAAACTACTACAAGGGCTCCGGTTGTATTAGCACGAATTCTCCAAAAGACATTAACTTGAATGTAGTGCTCTCAAAAAGCTTATCAAATGAGGCAGGTCAGCAACCAAACTACCGGACCAGAGAGGCAGAACAAAACAATGAGGACCATCATAATGTATTACCATGGACAAGGGCTGTACCTGCTAGTAAGAATGAAACGATCAATTCAAGAAGATTCTCTATGACTGCAGAGCTTAATTTTGTTCTCTCACCGAAGAAACAATTTTCTGACAGAAACGAAACTGAAAATGGCAGTAAAGTTATATGTTATCCAAACATCGAGTCTAATTCACATTGTAGTAACATTGAGCCAAGAATGTCTGAACACGGTGAATGCCAGAGTAACCGAAAACTTCTTGGGTTTCCCATTTTTGAAGGGCCACGCATTTCTAAGAATGAGTCATTTTCTCTTACATCCCCATCAGCACCTCCTCCTAATCCATCTGAGAATGAAGTGGAAGATAACCGGAAAACTAGAGTACTTGATATCAATTTGCCTTGTGATCCTTCAGTTTTTGAGTCAGACAACGTTACTACCGGAGCTCTGGCTGTAGAGAATGGAAAGGACACAAAGATCTCTACTGTGAGAGTTGATATTGATTTGAACTCGTGTGTCAGCGATGATGAACCATCTATGAGACCTCTACCCTTGGCTTCTTCAAGTGGCAAGGAAAAGGTCGTCGTAGAGATAGATTTAGAAGCCCCGGCAATGCCCGAGGCTGAAGACGACATAATTGCAGAAGAAGAATCTTTAGAAAAACAGCATGAACAGCAACCACAATCTCCTCAGCACAAGGCTGTTGATATTCAGGATGATCTTATGGCTTTAGCAGCAGAGGCAATACTTGCCATCTCTTCTTGTGTTCATTCCTGTCATTTGGATGATAGTGTTAGCAATGCGTTGGAAGATTCTTCAAGCGATCCCCTAAATTGGTTTGCTGAGATAGTTTCCACTCACGGAGATGATGTACAGGCCAAGTCTGACATTGTATGGAGATCCAAAGAAGGCAAGGATGCTGAGGAATCCTCTTTGAGAGGGATTGATTACTTTGAGTACATGACTTTGAGGCTGGCGGAGGTCGGTGAAGAAGACTACATGCCTAAGCCCTTGGTTCCAGAAAATATGGAAATTGAAGATACTGGAACCAATTTGTTGCAAAATCGGCCCCGAAAGGGCCAGACAAGGAGAGGTAGGCAGCGAAGGGACTTCCAGAAGGACATCCTTCCAGGCCTTTCTTCTCTATCAAGGCATGAGGTTACAGAAGATCTTCAGACGTTTGGTGGCCTAATGCGAGCGACGGGCCACTCTTGGCATTCTGGAGTTACAAGGAGGAACTCTACTAGAAATGGTTGCGGAAGAGGAAGACGACGATCTGTGATCAGTCCCCCGCCCCCTGTGCAATCAGCATGTAATCAGCTGATACAACAACTAAGTAACATTGAAATGGGGCTGGAAGATGGAAGCCTGACTGGTTGGGGCAAGACAACCAGACGGCCCCGTCGGCAAAGATGTCCGGCCGGTAACCCTCCGGCTGTCCCTTTAACTTAA 3180 43.14 MLTNFMSLFLEGRSFMVLEFFESEDVGLRNGNKGASGQYYNGILPRATSDAYLGCDRDAVKRTMLEHEAIFKNQVRELHRLYIKQRELMNDIKRSEHRHPIPVDISFSSSPLASQSTPDGARKWHLPSFPLAISSSGPSVPGVEDVKSSLSSLKENNRSDGLLPSQNGTSSKDCEVLESRPSKSRRKTFDLQLPADEYIDSEEGEVFQDEKVPPTLGCHSNGNKKFETQSCVTANLNVNPSEKSGGQSAALRTDSRLWNRYGLADLNEPVQVEEANGSNFFDLPNARDSSNGETQGPIVSSTKQEIFLSSNNEGGHATNRNLYIENGNRREAFPNIFEAGRSKESEKSFTHGQMEKFHLSSNPMQVPLNKFHELPVFYLNDKSKVQQDLDRPVSDLQLSKRSYEMSNTGDPGYLLASQTSRTYQIAPSLDVGKSWAHSSSSWEKSNGNRSQKMASGHTQPCFKSSAAVHKSFPSSAQNNGIFGDRWHLSSDSRSNPGSGCETPYQNGFYFGSTSGSNGGILSSSVRHDHGANYYKGSGCISTNSPKDINLNVVLSKSLSNEAGQQPNYRTREAEQNNEDHHNVLPWTRAVPASKNETINSRRFSMTAELNFVLSPKKQFSDRNETENGSKVICYPNIESNSHCSNIEPRMSEHGECQSNRKLLGFPIFEGPRISKNESFSLTSPSAPPPNPSENEVEDNRKTRVLDINLPCDPSVFESDNVTTGALAVENGKDTKISTVRVDIDLNSCVSDDEPSMRPLPLASSSGKEKVVVEIDLEAPAMPEAEDDIIAEEESLEKQHEQQPQSPQHKAVDIQDDLMALAAEAILAISSCVHSCHLDDSVSNALEDSSSDPLNWFAEIVSTHGDDVQAKSDIVWRSKEGKDAEESSLRGIDYFEYMTLRLAEVGEEDYMPKPLVPENMEIEDTGTNLLQNRPRKGQTRRGRQRRDFQKDILPGLSSLSRHEVTEDLQTFGGLMRATGHSWHSGVTRRNSTRNGCGRGRRRSVISPPPPVQSACNQLIQQLSNIEMGLEDGSLTGWGKTTRRPRRQRCPAGNPPAVPLT 1059
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36815124 36821818 - CrPI670011_05g025590.1 Cre05g2559 499072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2559 1059 MobiDBLite consensus disorder prediction 676 698 - -
Cre05g2559 1059 MobiDBLite consensus disorder prediction 1029 1059 - -
Cre05g2559 1059 MobiDBLite consensus disorder prediction 141 175 - -
Cre05g2559 1059 MobiDBLite consensus disorder prediction 135 185 - -
Cre05g2559 1059 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 571 1049 - -
Cre05g2559 1059 MobiDBLite consensus disorder prediction 980 1010 - -
Cre05g2559 1059 MobiDBLite consensus disorder prediction 437 460 - -
Cre05g2559 1059 Pfam Plant protein of unknown function (DUF863) 137 1049 IPR008581 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g2222 Cre-Chr6:30070408 Cre05g2559 Cre-Chr5:36815124 7.80E-06 transposed
Cre09g2137 Cre-Chr9:40356679 Cre05g2559 Cre-Chr5:36815124 6.20E-07 transposed
Cre01g1535 Cre-Chr1:28563287 Cre05g2559 Cre-Chr5:36815124 8.80E-14 wgd
Cre05g2559 Cre-Chr5:36815124 Cre08g0965 Cre-Chr8:22813437 1.30E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2559 - - - 0.0