Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2576 ATGACGAGAGCTTTTAGAAGACGAACTTCGTATTCAAGGCCTACAGATCGCCTCCGATTCCAGGCATCGGCGGACGGTGCTACGAAATCTGGATTCATCAGAGATATGAAGCTGAAGGAGATCTTGACTACTTTGCTTATAGGCCTTCCCTTGGTTGTTTTTGTTGTTTTGGTTCTTAGGAATCCAGCGGTGGATCTCTCTCTGGGTTTTGCCGAAGCCAGAGCATTGGGAAGAGTGGCCACTAATGGCGGTTCTGAGAGTTCAGGTTCAGAAAACGGTTTCTCTCGACTTTCCAATAGAGACAAACTTATTGGAGGTCTTCTCCTTCCTGGATTTGATGAAGGATCATGCTTAAGCAGATATCAATCCAGTTTATATCGAAGAACTTCAACCCACAAACCTTCTCCTTACCTCCTCTCGAAGCTTAGAGACTACGAAGCACTTCATCGACAGTGTGGTCCCCATACGAAACCATACGATGAAGCAGTAGAGCAACTCAGATCTGGCAGTAGTGTTAGTTTGTCAGAGTGTAAATATGTTGTGTGGATATCTTATAGTGGCTTGGGAAACAAGATACTCACTTTGGCTTCTGCATTTCTTTATGCCCTCCTTACCAATCGTGTCTTGCTTGTTGATCCAGGGAAGGATATGGCTGATCTATTTTGTGAGCCTTTCCCAGAAAAATCTTGGTTGCTACCAAATGACTTCCCCTTGGTGGATCAATTCAGCCATTTTGATTCGAAATTTCCTAATTGTCATGGAAATATGCTTAAGATGAACACTCTAAACACGTCAACAGAATCACTCCCATCCTATCTATACCTACATTTGGTCCATGATTATGATGATCATGACAAGCTCTTCTTCTGTGATCAAGAACAGGCTCTTTTGGGCAGGATCCCTTGGCTAATACTCAAGACAGATAACTACTTTGTTCCATCTCTCTTCTTGATCCCATCGTTCGAGCACGAACTCAGTAACTTGTTCCCCCAAAAAGACACCGTCTTCCATCATCTGGGCCGGTATCTTTTCCACCCATCGAATCATGTTTGGGGACTAATAACGAGATACTACGAATCATATCTATCAAGTGCTGATGAAAGAATAGGAATTCAAGTAAGAGTGTTCGAGAGTGAACCGGGGCCATTTGAACATATAATGGATCAGATTTTAGGCTGTACTCTTAAGGAGAAGTTACTGCCTGAGGTAGACAAGGAAGGCTTCTCTTCTGTTCCTTTGGAACGCCCAAGTGTAAAAGCTGTTTTGATGACATCTTTAAGTTCTGGATATTATGAAAAATTGAGAAGCTTGTACTGGGAATACCCGACCACAAGTGGAGAGGTCATTGCAGTTTATCAGCCGAGCTACGAAATGTATCAGCAGACAGAGAAGAAGACTCACAATAGGAAAGCATGGGCAGAAATGTACCTTCTGAGTTTGAGCAATGTGTTGGTGACCAGTGCATGGTCAACATTCGGGTATGTGGCTCAAGGACTTGGCGGATCGAAGCCATGGATTCTTTACAAGGCTGAGAACATGACCACGCCCGATCCACCATGTCGTAGGGCAATGTCAATGGAGCCTTGCTTTCATGCTCCTCCATTCTATGACTGCAAGGCAAAGAAAGGAATAGATACTGGTGAAGTTGTTCCACATGTAAGACATTGTGAAGACATGAACTGGGGGCTTAAGCTTGTTCACCATGAGGATTTATAA 1716 43.65 MTRAFRRRTSYSRPTDRLRFQASADGATKSGFIRDMKLKEILTTLLIGLPLVVFVVLVLRNPAVDLSLGFAEARALGRVATNGGSESSGSENGFSRLSNRDKLIGGLLLPGFDEGSCLSRYQSSLYRRTSTHKPSPYLLSKLRDYEALHRQCGPHTKPYDEAVEQLRSGSSVSLSECKYVVWISYSGLGNKILTLASAFLYALLTNRVLLVDPGKDMADLFCEPFPEKSWLLPNDFPLVDQFSHFDSKFPNCHGNMLKMNTLNTSTESLPSYLYLHLVHDYDDHDKLFFCDQEQALLGRIPWLILKTDNYFVPSLFLIPSFEHELSNLFPQKDTVFHHLGRYLFHPSNHVWGLITRYYESYLSSADERIGIQVRVFESEPGPFEHIMDQILGCTLKEKLLPEVDKEGFSSVPLERPSVKAVLMTSLSSGYYEKLRSLYWEYPTTSGEVIAVYQPSYEMYQQTEKKTHNRKAWAEMYLLSLSNVLVTSAWSTFGYVAQGLGGSKPWILYKAENMTTPDPPCRRAMSMEPCFHAPPFYDCKAKKGIDTGEVVPHVRHCEDMNWGLKLVHHEDL 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36970373 36972854 + CrPI670011_05g025760.1 Cre05g2576 499089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2576 571 Gene3D - 174 225 - -
Cre05g2576 571 FunFam Galactoside 2-alpha-L-fucosyltransferase 175 226 - -
Cre05g2576 571 PANTHER FUCOSYLTRANSFERASE 2-RELATED 40 568 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cre05g2576 571 Pfam Xyloglucan fucosyltransferase 98 539 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1442 Cre-Chr7:29480329 Cre05g2576 Cre-Chr5:36970373 8.80E-157 transposed
Cre01g1543 Cre-Chr1:28633401 Cre05g2576 Cre-Chr5:36970373 4.60E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2576 K13681 - csv:101216541 1051.2