Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2601 ATGGAAGAGAAACAAAGCGATGTGGTGTTGTTTGGAACGTGGTATAGTTCATACTGCACTAGAATTGTGCTAGCACTAAAAATCAAAGGCATAAACTTTGAGTATGTGGAAGAAGATTTAGCAAATAAGAGTGAATTGCTTCTCCAGTACAATCCAGTTCATCAAAAAGTCCCAGTACTCGTCCATAAAGGAAGGCCAATTGCAGAGTCCTTTGTCATTCTTGAATACATAGAAGAAAATTGGAACTACCATCCCAAAATTCTACCTGATCACCCATATGAAAGAGCCAAAGTTCGCTTCTGGGCGCAATTCTATGATCAAAAGGTTTGA 330 38.79 MEEKQSDVVLFGTWYSSYCTRIVLALKIKGINFEYVEEDLANKSELLLQYNPVHQKVPVLVHKGRPIAESFVILEYIEENWNYHPKILPDHPYERAKVRFWAQFYDQKV 109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37106836 37107165 - CrPI670011_05g026010.1 Cre05g2601 499114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2601 109 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Cre05g2601 109 FunFam Tau class glutathione S-transferase 1 89 - -
Cre05g2601 109 CDD GST_N_Tau 8 81 - -
Cre05g2601 109 SFLD Glutathione Transferase (cytosolic) 9 108 IPR040079 -
Cre05g2601 109 Gene3D Glutaredoxin 1 86 - -
Cre05g2601 109 SFLD Main (cytGST) 9 108 - -
Cre05g2601 109 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Cre05g2601 109 Gene3D - 87 109 - -
Cre05g2601 109 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 108 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cre05g2601 109 ProSiteProfiles Glutaredoxin domain profile. 1 95 - -
Cre05g2601 109 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2601 Cre-Chr5:37106836 Cre07g1423 Cre-Chr7:29256324 8.10E-30 dispersed
Cre05g0336 Cre-Chr5:3082789 Cre05g2601 Cre-Chr5:37106836 5.50E-33 transposed
Cre06g2315 Cre-Chr6:31098298 Cre05g2601 Cre-Chr5:37106836 1.40E-26 transposed
Cre09g1687 Cre-Chr9:34714983 Cre05g2601 Cre-Chr5:37106836 2.10E-24 transposed
Cre01g1560 Cre-Chr1:28782687 Cre05g2601 Cre-Chr5:37106836 7.90E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2601 K00799 - vvi:100260235 175.252