Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2663 ATGGATTTGCTGCTTCACCTTCAGCTTCAACCATGGCAGCTTCATCTCTTCCTTTTCTTCCTTTCTGTTTCCCCTGTTTGTTATTGCCAACTCAGTCCCCCTCAAAATATCGAAACCTTCTACCCTTCCCCATTTATTCCTCAACCACCGTCGCCAATTTCGCCGTCGTCTTCACTTGACCATCCGCCGTCGTCCACGTCAACCAAGACCATCGCCACGGCGGTGGCTGTCACTGCAGTGGGTGTGGCTCTGCTTTCCACGTTGTTCTTCTTCTTAATACAGAGATATGTGATCGGAAGAAAACGAAAAACAGAGGAGGCAAATTCAGGGACCGGTCCGGGTTTGGTCTCGCAGCCGGCGGTTGCTCAGAATGAATTTTCACGTGTTGATGGGAATCTTAAAGGGTTTATTGTGGATGAAAATGGGTTGGATGTGATTTATTGGAAGAGACTTGAAAGAAAGAAATCCAAGAATAGCTTTGATCGGAGTGACGGAGAAAGAAATGTTAAGGAAAATCGAAGCAAAAAGTCAGAGTCTGTTCAAGAAATTCCTCTGCTTCGAGGAAAATCTTCAACTTCACATGTTAAAATTGCACCGGAAGATGAAGAATCCAGTGGGAATACATCTCCTCCGCCCCCTCCACCGCCCCAGATTAACAACCCTCCGCCATTTACTGGGAATTCTGTTCAGTCAGTTGGAAAACCATCGAGTAGTTCAAATCTTTCATTAACAGCACCACCGCTACCGGCGGCAATTCCAGTACCTCCGTCACAATCTCTCATGGCTGTTCCCAACAATAAGAGCTCTGTTCCGCCACCGCCCCCACCGATTCCAGCAAAGACCAATTCAAGTCTGCCGCCGCCGCCACCTCCCATTCCGGCTAAGACCAATTCAAGACCGCCGCCACCACCTATTCAATCCAAGACCAATTCAGCAGCTCCACCTCCCCCTCCTATACCGGCCAAGGCAAATCCGGCAGCACCAGCGCCGCCACCGCCCAAGGCCGGCGGTTCAAAATTGCCCTTAAGGCCTGCACCTCAAAAAGAGGGTAATAAATCCTCTAGAGAGGGTTCTTCATCAGCCGACAATGGTCAGGTCAAAATGAAGCCCCTGCATTGGGATAAAGTGAACACTGCAAATGCTGATCATTCCATGGTTTGGGACAAAATGAGCGCCGGTTCTTTCAAATTTGATGGGGATCTTATGGAAGCTCTGTTTGGATATGTCGCAACCAACCGGAAATCCCCACGGAGTGAAGCTAGTTCTACAGCAAACGCCGTTGGCCGAAACTCAGGGCTGTCGCAAACTTTCATTCTTGAACCGAAAAAATCTCAGAACATAGCCATTGTGGTCAAGTCCTTGACTATTCCTCGCAACGAAATCCTCGATGCGCTCAACGAAGGTCAAGGACTCGAAACAGAGATTCTTGAAAAACTCACAAGAATTGCTCTGACTCAAGAAGAAATTTCCCAAATTCTTGCTTACAAAGGAGACCCCCAGCAGCTTGCTGATGCTGAATCTTTCCTTTACCATCTTCTCAAATCGGTTCCATCTGCCTTTGCTCGTTTCAATGCCATGCTTTTCCGAATGAATTTCACTTCGGAGATTCTCCATCTCAAGGAATCTCTAGAAACTCTGGAGTCCGCCTGCAAGGAGCTTAGAACTCGAGGGCTGTTTTTAAAATTGCTTGAAGCAATTCTCAAAGCTGGGAATCGGCTAAATGCAGGAACTGCAAGAGGAAATGCCAGAGCTTTCAACCTTACAGCTCTTCGGAAGCTCTCGGATGTTCGAAGCACCGATGGGAAAACCACTTTGCTTCACTTTGTAGTGCAAGAAGTGATCAGGGCAGAAGGGAAAAAGTGTGTTTTAAACAAAAACAAGAGCTTGAGCCGTAATAGCAGCCATAGCAGTGACAACAGCTTTAGCAGCTCCGAAAATTCGACTGCGAAGGAGGACAAAGTAAAGGAATATATGATGTTGGGACTGCCAGTTGTGGGAGGTCTAAGCGCTGAATTCTCTAATGTAAAGAAAGCGGCAGCGATCGACTTCGAGAGCTTCGTCAAGGCTGGGTCATCTCTGACTAGCCGAACCGCAGAAATCCGGCAGCTCTTAACTCAAATTGGGAACAACGAAGGTGGTTTTGCTAAAGAAATGAGAGGGTTTCTTGAGGCAGCAGAGAATGAGCTGAAGGTGGTGAGAGAAGAACAGACAAAGGTGATGGAGTTAGTGATGAAGACAACAGAGTATTATCAGGCAGGAAGTTCAAAAGATAAAGAAGCAAATCGGCTTCAATTATTCATCATAGTAAAAGATTTCCTAGAAATGGTAGATCGGGTTTGTGTTGAAATTACTCGAGATCTCCAGAGGAGGAGATCATCGGGAGTAAATGTGGGTTCGGGTTCATCACCGGTGAGATCGAAGGCCATCTTCCATAACTTGCCGGAAAATTTTATGTCAGACAAGTCCAGAGGCAGTTCTAGTGATACAGATGATGAATTCTGA 2502 46.84 MDLLLHLQLQPWQLHLFLFFLSVSPVCYCQLSPPQNIETFYPSPFIPQPPSPISPSSSLDHPPSSTSTKTIATAVAVTAVGVALLSTLFFFLIQRYVIGRKRKTEEANSGTGPGLVSQPAVAQNEFSRVDGNLKGFIVDENGLDVIYWKRLERKKSKNSFDRSDGERNVKENRSKKSESVQEIPLLRGKSSTSHVKIAPEDEESSGNTSPPPPPPPQINNPPPFTGNSVQSVGKPSSSSNLSLTAPPLPAAIPVPPSQSLMAVPNNKSSVPPPPPPIPAKTNSSLPPPPPPIPAKTNSRPPPPPIQSKTNSAAPPPPPIPAKANPAAPAPPPPKAGGSKLPLRPAPQKEGNKSSREGSSSADNGQVKMKPLHWDKVNTANADHSMVWDKMSAGSFKFDGDLMEALFGYVATNRKSPRSEASSTANAVGRNSGLSQTFILEPKKSQNIAIVVKSLTIPRNEILDALNEGQGLETEILEKLTRIALTQEEISQILAYKGDPQQLADAESFLYHLLKSVPSAFARFNAMLFRMNFTSEILHLKESLETLESACKELRTRGLFLKLLEAILKAGNRLNAGTARGNARAFNLTALRKLSDVRSTDGKTTLLHFVVQEVIRAEGKKCVLNKNKSLSRNSSHSSDNSFSSSENSTAKEDKVKEYMMLGLPVVGGLSAEFSNVKKAAAIDFESFVKAGSSLTSRTAEIRQLLTQIGNNEGGFAKEMRGFLEAAENELKVVREEQTKVMELVMKTTEYYQAGSSKDKEANRLQLFIIVKDFLEMVDRVCVEITRDLQRRRSSGVNVGSGSSPVRSKAIFHNLPENFMSDKSRGSSSDTDDEF 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37607051 37609633 - CrPI670011_05g026630.1 Cre05g2663 499176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2663 833 MobiDBLite consensus disorder prediction 267 339 - -
Cre05g2663 833 Pfam Formin Homology 2 Domain 361 776 IPR015425 -
Cre05g2663 833 Gene3D Formin, FH2 domain 378 794 IPR042201 -
Cre05g2663 833 PANTHER FORMIN-RELATED 32 831 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cre05g2663 833 MobiDBLite consensus disorder prediction 156 182 - -
Cre05g2663 833 MobiDBLite consensus disorder prediction 627 648 - -
Cre05g2663 833 Coils Coil 536 556 - -
Cre05g2663 833 Coils Coil 715 742 - -
Cre05g2663 833 SUPERFAMILY Formin homology 2 domain (FH2 domain) 436 789 - -
Cre05g2663 833 MobiDBLite consensus disorder prediction 351 365 - -
Cre05g2663 833 MobiDBLite consensus disorder prediction 206 222 - -
Cre05g2663 833 MobiDBLite consensus disorder prediction 223 245 - -
Cre05g2663 833 ProSiteProfiles Formin homology-2 (FH2) domain profile. 358 802 IPR015425 -
Cre05g2663 833 MobiDBLite consensus disorder prediction 156 370 - -
Cre05g2663 833 MobiDBLite consensus disorder prediction 627 647 - -
Cre05g2663 833 SMART it6_source 358 791 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2663 Cre-Chr5:37607051 Cre08g0831 Cre-Chr8:21398118 1.30E-111 dispersed
Cre05g2663 Cre-Chr5:37607051 Cre06g2459 Cre-Chr6:32402265 3.20E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2663 K28090 - csv:101208197 1161.75