Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2687 ATGGATCTGGAAAGTGGAGTTGTTAGTGAAAAGAATGCGAAGAAGGATTCATGGAAGACGGTTTTGATGATGGCTTATCAGAGTCTTGGGGTTGTTTATGGGGAGTTGGGCACTTCGCCTTTATATGTCTATAAGAACACTTTTGCAGAAGAAGATATCAATCATACCAAGAGCAACGATGAGATTTATGGGGTTTTGTCCTTTGTTTTCTGGACTCTGACCATTGTTCCTTTGCTCAAGTACATATTTATCGTTCTTAAAGCTGATGATAATGGGGAGGGAGGGACATTTGCTCTGTATTCGTTACTGTGTCGACATGCCCGAGTTAGCTCATTGCCCAATACCCAGTTGGCTGATTCTGAACTCACCGAGTACAAGATGAATGTCCTTGGTCCACCATCTCAACAAAGTTTTGGATTCAAACTCAAATCAGCACTAGAAAAGCGTCGTGTTCTGCAAAAATTCTTGCTCGTTCTTGCTTTAATTGGGACTTGTATGGTGATAGGGGATGGCATCTTAACACCGGCTATTTCTGTTCTTTCGGCGGTTTCTGGCCTCGAACATACCATGGCGAAAGAGCATCACCAATATACAGTAATCCCAATTGCATGCGTCGTACTGATATGCTTGTTTGCGCTTCAACACTACGGCACTCACAGGATCGGCTTCTTGTTTGCTCCCATAGTGATAGTTTGGCTAGTGTGTATTAGTGCCATTGGCCTGTACAATATTATTCACTGGAATCCGGGTGTTTATAGAGCAATTTCTCCTCGTTACATGTTCCAGTTTCTTAAGAAAACACAAAAAGGAGGTTGGATGTCACTTGGTGGAATAATGTTGTGCATTACTGGTTCAGAGGCGATGTTTGCTGACCTTGGGCATTTTTCTCAGTTGTCAATTAAGATTGCTTTCACTTTTATGGTTTATCCGTCTCTCCTCCTAGCATACATGGGGCAAGCTGCCTATCTGTCCCAACATCATCCTCCAAATGATCATTCAATTGGGTTTTATGTATCTGTTCCTGATAAATTGAAGTGGCCTGTCCTTATAATTGCTGTGCTTGCTGCAGTAGTAGGAAGCCAGGCTATAATCACCGGAACTTTCTCGATTATAAAGCAGTGCTCTGCTTTGGGTTGCTTTCCTCGAGTTAAAATTATTCATACGTCCTCAAAAGTTCACGGTCAGATCTATATCCCAGAGGTCAATTGGATTTTGATGCTGTTGTGCTTGGCTGTTACCTTAGGTTTCAGAGACACAAAGCGCCTGGGCCATGCCTCAGGTTTGGCAGTGATAACTGTGATGCTTGTTACTACATGCTTGATGTCGCTTGTTATCGTCCTGTGCTGGCACCGAAGTGTATTTCTTGCAATAGGCTTCATCTTCTTTTTTGGCACCATTGAATCTCTCTACTTCTCAGCTTCTCTTATAAAATTTCTTGAAGGAGCTTGGGTTCCCATCGCAATTTCTCTTGTGTTCCTGATCGTTATGTATGTCTGGCACTATGGTACTCTGAAGAAGTTTGAATTCGACATCCAAAACAAGGTTTCTATTAACTGGCTACTTAGTTTTGGTCGCAACTTAGGCATTGTAAGAGTCCGTGGGATTGGCGTCATACAAACGGAGCTTGTTTCGGGTATCCCGGGTATCTTCACCCACTTTGTCACCAATATTCCCGCCTTCCATCAAGTTCTTGTTTTCCTTTGCATCAAATATGTCCCAGTGCCACATGTTAGACCAGAGGAACGGTTTCTAATTGGTCGTATTGATACGAGTGAATACAGACTCTACCGGTGCATTGTGCGATATGGGTATCGAGATGTTCACAAAGACGATGTAGAGTTCGAGAATGATCTTATATGCAGCATAGCAGAGTTTATAAGGTCAGGGACTGCAGTGTCCGGTGATTCTAAACCGGACTTTGATAAAGATGGTGAAAAGATGTCAGTCGTCGGGACATCTTCTACCCATGAAGATAGGATGCAGATGGCTGAGACCGATAATGAAGAAGACTCTGAAGAACTGTACCAAGCTTCAGATACAAGGGAAATAAGGTCACCAGCTCCAGTTCAATTGAGAAAAAGAGTACGCTTCATTGTACCTGAGAGCCCGGAAATCAACACTGATGCAATGGCAGAATTACAAGAGCTAAGGGAAGCAAGAGAAGGAGGAGTAGCTTACATATTAGGACGGTCGCACATGAAAGCAAAACAAGGATCGAGCATGCTGAAAAGGGTGTCGATCGACTTCATTTATGAGTTCTTAAGGAAGAACAGCAGAGAAGCCGACTTCCCAGTAGGTTTATCACATTCATCATCAACCCTTGAGGTGGGTATGATGTATCTTGTTTAA 2349 43.0 MDLESGVVSEKNAKKDSWKTVLMMAYQSLGVVYGELGTSPLYVYKNTFAEEDINHTKSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADSELTEYKMNVLGPPSQQSFGFKLKSALEKRRVLQKFLLVLALIGTCMVIGDGILTPAISVLSAVSGLEHTMAKEHHQYTVIPIACVVLICLFALQHYGTHRIGFLFAPIVIVWLVCISAIGLYNIIHWNPGVYRAISPRYMFQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFTFMVYPSLLLAYMGQAAYLSQHHPPNDHSIGFYVSVPDKLKWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKVHGQIYIPEVNWILMLLCLAVTLGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLIKFLEGAWVPIAISLVFLIVMYVWHYGTLKKFEFDIQNKVSINWLLSFGRNLGIVRVRGIGVIQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKYVPVPHVRPEERFLIGRIDTSEYRLYRCIVRYGYRDVHKDDVEFENDLICSIAEFIRSGTAVSGDSKPDFDKDGEKMSVVGTSSTHEDRMQMAETDNEEDSEELYQASDTREIRSPAPVQLRKRVRFIVPESPEINTDAMAELQELREAREGGVAYILGRSHMKAKQGSSMLKRVSIDFIYEFLRKNSREADFPVGLSHSSSTLEVGMMYLV 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37815408 37820388 - CrPI670011_05g026870.1 Cre05g2687 499200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2687 782 Pfam K+ potassium transporter integral membrane domain 25 521 IPR053951 -
Cre05g2687 782 Pfam K+ potassium transporter C-terminal domain 534 778 IPR053952 -
Cre05g2687 782 NCBIfam potassium uptake protein 24 780 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre05g2687 782 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 781 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre05g2687 782 MobiDBLite consensus disorder prediction 631 677 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2687 Cre-Chr5:37815408 Cre07g0885 Cre-Chr7:7660789 1.20E-276 dispersed
Cre03g0376 Cre-Chr3:2182806 Cre05g2687 Cre-Chr5:37815408 1.90E-226 transposed
Cre01g0568 Cre-Chr1:4987854 Cre05g2687 Cre-Chr5:37815408 8.2e-313 wgd
Cre10g1582 Cre-Chr10:29861172 Cre05g2687 Cre-Chr5:37815408 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2687 K03549 - csv:101212925 1494.56