Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2700 ATGGTCGAGAGTTCAACCCTCGACCATAGGTCACGGGCGACGGCAGCCGCAGCGGTGGCAGGGAATCTCTGCGACGACGCGACGGGACCTGCGGCGGAATCTCTGCGACGACGCGACAGGACCTGCGGCGGATTCTCTGCGACGACGGGACGGGACCTGTGGAGGACGGAATCTCTAAATTTTGGAGCAGAATTGATGGTTCCCATGGCATCTTTCAGTTCTTATCGTTTCTCCCAAGATTTGGGCAAAACAAATAACAGTGCATTGCAAGAGGAAGAGGAGGAGGATTGCGAGAGAAGAAGAATAATGTCTTCTTCAAACGATACTTCTTCTCCTTCGTCGGATTCTATTTCAGATTCAAGTTTGCCGCCTGAAGCTTTGGATTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTACTCCTACTCCCTCTTCTCCTCCACCCTCACCGCAGACAGATGGTTTTTCATCGATGATATTGAATCATGATGATGGTTTTCTGCCGTCGACTCTTTCATCCGCAACTAAAGCTCCACCTATCGACGACCTAGTTTCACCATCTTCCTCACCTCCAGCTCCTCCAGATCCTGGAACTACACCGCCGGCCCCTACTGGCGACTCCGATTCAAATGCAGCTGGCGACAATCCCTCGCCACCGCCTGAAGATTCTGCTTCGCCACCGCCGTCTCCTCAGCCGCGGCCTCATCCACCACCGCCTTCACCTCCGCCTCCACAACAGCCGTCTATGGTTGGCGTCGTTAATCCTCCACCTACCCCTGTTCCGACTACAAAAGCATCTCCGACACCTCCAGGAAGCCCACCTTCTCCAATATCTGAGGATGAACCCTTTGTCCCGGTGGATCAGAGCGCCGTTCAGACTCCTAATACAGACAAGGAGCCTCCACCATCTGAACCAACGGATGCCCTTCCTCCATCAGAAAATCCAGTCACGATTCCTTCACCAGCTGCAAACCCGGCGACGGGGAAACGAACTCCGAGTCCACCTCAAGGAATTGCTACTCCCACATCAGAGTCTAACATTCTTTCACCTCCCACAACCACATTCACATCCACATCCACATCCACTCGCACTCCGAACAACTCACCTCATTTCGCCGACTCAACGCCAGTGAAATCACCATTAGGGCAGTCCAATGCACCATCGTCTGGTTCAAGTAGTCAAACCGATGTTGCAGTAGGCGCTGCAGTCGCTGGAGTTTTCGTAATCGTTTTGGTTGCTGTGGTTTTTATGTTCACAAGGAAGAAGAAAAGACGGAGAGAGATGTATACGGGCCCCTACATGCCTCCTAATAATTTCGGTGTGAAATCAGATGGAAATTACTATCCACATCAACATGGGGGTAACTCTGGTTCTACTGAAGGCTTCTATACTCAGGTCCCACACACTCCCGTTGGAAATAGCTTTGGGAGTCAAAGAGGAACAGGATACAGTGGCAGTGGAACAGAGTCAGGTGTGATAAACAGTGCCAAGTTCTTCTTTAGCTATGAAGAATTGATGGAGATTACGTCTGGATTTTCGCGTCAAAACATTCTTGGGGAAGGTGGGTTTGGATGTGTTTACCAGGGTTGGCTTCCAGAAGGGAAGTCGGTGGCTGTGAAGCAACTCAAGGCAGGAAGTGGACAGGGGGAGAGGGAATTCAAGGCAGAAGTTGAGATTATCAGTCGTGTTCATCATCGACATTTGGTGTCTTTAGTGGGCTATTGCGTCTCTGAGCATCATAGATTGCTCATCTATGAGTTTGTTCCTAATAAGACTCTCGAGCATCATCTCCATAGTGGTAATGGAGTGCCTGTGTTGGATTGGTCCAAAAGACTCAAAATCGCTTTAGGAGCTGCAAAGGGTTTGGCATATCTTCATGAAGATTGTCATCCCAGAATTATCCACCGAGACATCAAGTCAGCCAACATTTTGCTGGATGACGCTTTTGAGGCGCAGGTCGCAGATTTTGGACTTGCGAAACTGACAAATGATACACACACCCACGTTTCCACTCGTGTCATGGGGACATTTGGATACATGGCACCCGAGTACGCATCAAGTGGGAAATTGACAGACAGATCAGATGTATTCTCGTTTGGGGTTGTGCTTCTTGAGCTTATTACTGGTCGTAAGCCTGTTGATCCAACTCAGCCCCTGGGGGATGAGAGTTTGGTTGAATGGGCTCGTCCACACCTCCTGCACGCCCTTGAAACCGGGGAGTTTGACGGATTGATAGATCCACGCCTTGGAAAACAGTATGTGGAAAGTGAAATGTTCAGAATGATCGAAGCAGCAGCTGCCTGTGTTCGTCATTCCGCTCCCAAAAGGCCTCGCATGGTTCAGGTGGTGAGAGCACTAGACATTGAAAGTGACATGTCTGACCTCTCCAATGGTGTTAAATATGGCCAAAGCACCATCTATGATTCTGGACAATACAATCAAGACATTTCTAAATTCAGAAGAATGGCACTCGGTTCAGACAGCTTCGAATACGATATTTACAGTAGCGAATACAATTCCAGAGAAATGACTGCAAGTCGTGAATCATGGAGATTCAACACTAACTCAAGTGGTGAATCAGAAACTCAAGCTTTTAAAGGACGAACTGGGGCACAACAAAGTCACCATAGTGGTCGACAATTCTAA 2655 49.23 MVESSTLDHRSRATAAAAVAGNLCDDATGPAAESLRRRDRTCGGFSATTGRDLWRTESLNFGAELMVPMASFSSYRFSQDLGKTNNSALQEEEEEDCERRRIMSSSNDTSSPSSDSISDSSLPPEALDSSSSSPPPPPPPPPTPTPSSPPPSPQTDGFSSMILNHDDGFLPSTLSSATKAPPIDDLVSPSSSPPAPPDPGTTPPAPTGDSDSNAAGDNPSPPPEDSASPPPSPQPRPHPPPPSPPPPQQPSMVGVVNPPPTPVPTTKASPTPPGSPPSPISEDEPFVPVDQSAVQTPNTDKEPPPSEPTDALPPSENPVTIPSPAANPATGKRTPSPPQGIATPTSESNILSPPTTTFTSTSTSTRTPNNSPHFADSTPVKSPLGQSNAPSSGSSSQTDVAVGAAVAGVFVIVLVAVVFMFTRKKKRRREMYTGPYMPPNNFGVKSDGNYYPHQHGGNSGSTEGFYTQVPHTPVGNSFGSQRGTGYSGSGTESGVINSAKFFFSYEELMEITSGFSRQNILGEGGFGCVYQGWLPEGKSVAVKQLKAGSGQGEREFKAEVEIISRVHHRHLVSLVGYCVSEHHRLLIYEFVPNKTLEHHLHSGNGVPVLDWSKRLKIALGAAKGLAYLHEDCHPRIIHRDIKSANILLDDAFEAQVADFGLAKLTNDTHTHVSTRVMGTFGYMAPEYASSGKLTDRSDVFSFGVVLLELITGRKPVDPTQPLGDESLVEWARPHLLHALETGEFDGLIDPRLGKQYVESEMFRMIEAAAACVRHSAPKRPRMVQVVRALDIESDMSDLSNGVKYGQSTIYDSGQYNQDISKFRRMALGSDSFEYDIYSSEYNSREMTASRESWRFNTNSSGESETQAFKGRTGAQQSHHSGRQF 884
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37929580 37936346 + CrPI670011_05g027000.1 Cre05g2700 499213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2700 884 MobiDBLite consensus disorder prediction 87 103 - -
Cre05g2700 884 FunFam proline-rich receptor-like protein kinase PERK8 591 804 - -
Cre05g2700 884 Gene3D Transferase(Phosphotransferase) domain 1 591 806 - -
Cre05g2700 884 MobiDBLite consensus disorder prediction 222 283 - -
Cre05g2700 884 MobiDBLite consensus disorder prediction 205 219 - -
Cre05g2700 884 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre05g2700 884 CDD STKc_IRAK 521 790 - -
Cre05g2700 884 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524(InterPro)
Cre05g2700 884 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 368 825 IPR047117 -
Cre05g2700 884 PRINTS Proline rich extensin signature 130 151 - -
Cre05g2700 884 PRINTS Proline rich extensin signature 217 242 - -
Cre05g2700 884 PRINTS Proline rich extensin signature 186 203 - -
Cre05g2700 884 MobiDBLite consensus disorder prediction 129 153 - -
Cre05g2700 884 SMART serkin_6 515 789 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g2700 884 MobiDBLite consensus disorder prediction 301 321 - -
Cre05g2700 884 MobiDBLite consensus disorder prediction 855 884 - -
Cre05g2700 884 FunFam Proline-rich receptor-like protein kinase PERK8 488 590 - -
Cre05g2700 884 Gene3D Phosphorylase Kinase; domain 1 484 590 - -
Cre05g2700 884 MobiDBLite consensus disorder prediction 104 128 - -
Cre05g2700 884 MobiDBLite consensus disorder prediction 84 397 - -
Cre05g2700 884 MobiDBLite consensus disorder prediction 187 204 - -
Cre05g2700 884 SUPERFAMILY Protein kinase-like (PK-like) 496 789 IPR011009 -
Cre05g2700 884 Pfam Protein tyrosine and serine/threonine kinase 518 787 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre05g2700 884 ProSiteProfiles Protein kinase domain profile. 515 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g2700 884 MobiDBLite consensus disorder prediction 322 397 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0367 Cre-Chr4:11621087 Cre05g2700 Cre-Chr5:37929580 3.60E-21 dispersed
Cre04g1747 Cre-Chr4:35534965 Cre05g2700 Cre-Chr5:37929580 2.80E-17 dispersed
Cre05g2494 Cre-Chr5:36345912 Cre05g2700 Cre-Chr5:37929580 1.20E-132 dispersed
Cre05g2700 Cre-Chr5:37929580 Cre11g0731 Cre-Chr11:4424489 1.40E-132 dispersed
Cre06g1834 Cre-Chr6:22145868 Cre05g2700 Cre-Chr5:37929580 1.60E-15 dispersed
Cre10g0777 Cre-Chr10:7616808 Cre05g2700 Cre-Chr5:37929580 1.00E-07 dispersed
Cre11g2262 Cre-Chr11:34386474 Cre05g2700 Cre-Chr5:37929580 6.60E-19 dispersed
Cre05g2700 Cre-Chr5:37929580 Cre11g1014 Cre-Chr11:7454804 1.20E-139 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64179 PF07714 PK_Tyr_Ser-Thr 2.90E-44 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2700 - - - 0.0