Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2715 ATGAAACCCTACAACTTCTCCTTTGCGATTCCCTTCCTTCTAATACTCTTGCTATTTCGTCTTCTAATCCAATCGGCGGCTGATCCCAGAGCTACTGAGGCGGCTCTCATATGTTCCAACAACACTGCTTCGCCGCCGGAGCGATCGACCTTTGTGTCGAATTTCTTGGACTCTATGGATGCGGTTACTCCTCTTATTGCTTCACAGCGATTTGCAGCCGTTGTGAATGGGACTGGAAATACGTCTGTTTATGCTTTTGGAGAGTGTATGAACGATCTTACTCAATCGGATTGTGATCTCTGTTTTGCCCAGATGAAAACTCAGATCCTGCGGTGTCTCCCCTTTCAGCTTGCTACTCGAGGGGGCAGACTTTTCTATGACGGGTGTTATGTTAGGTATGATTATTATAACTTCTTTAACGAATCCTTGAGTGCTGTGGATAGGACTGTATGTGGGAAATCGGATTACAGTGGGAATCGGACTATTTTTAGTGACAATGCTATGAAATTGGCGAGGAATTTGAGTGTAGTAGCGCCCAAGAACGATGGGTTTGCTGTGGGATTGGTGAATTTGAGAAATGTGTCCGTTTATGGATTGGGTCAGTGTTGGAAATTTGTGAAAGGGACTTCTTGTTCCAAGTGTTTGGTTGATGCAGCTAAGGAAATTGGTTCTTGTCCTCCAAAAACTGAAGGAAGGGTGTTGAATGCTGGCTGTTACTTCAGATATTCAACTGAACGATTTTATTTCAACAGCACGGCAACCGCTACCGGAGGAAATGGAAGCCGTCGTCTGGCGGTAATTTTGGCTTCAGTATCTGCTGCTGTGGCTGCTGCATTGATTATTTCAACGGTTGTTTTCTGTGCCAGAAGGAGAGTAGTCAGGAAACGCAAAGAGAAAAAGCAACTCGGTCCTCTTGTGGCTATTGTTAACAAGTCCAAGCTTAATTTTTCATATGAGACTCTTGAGAGGGCCACAAATTACTTTGACCAATCCAATAAACTAGGACAAGGAGGTTCTGGTTCAGTTTATAAAGGAACCCTATCAGATGGCAGAGTTGTAGCAATCAAGAGGCTTTTCTTCAATACAAGACAATGGGTGGACCATTTCTTTAATGAAGTAAATCTTATTAGTGGCATCCGACACAAAAATCTTGTAGGGCTGCTGGGATGCAGCATTACAGGCCCTGAAAGCCTCCTTGTTTATGAATACGTGCCAAATCAGAGCTTGCACGATTACCTGTTTGGTAACAAGAATGTCCAGCCACTGAGTTGGGAATCCAGGTTTAAGATTGTCTTAGGCACAGCTGAAGGCTTGGCTTATCTTCATGAGGAGTCAAATGTGAAAATCATTCATCGCGACATAAAACTAAGCAATATTCTGCTGGACAATGATTTCACTCCGAAGATTGCTGATTTTGGACTTGCTAGACTGCTTCCCGAAGATAAGACACACATTAGTACCGCAATTGCTGGCACACTAGGTTACATGGCTCCTGAATATGTAGTGCGTGGCAAGTTGTCTGAAAAGGCCGATGTTTACAGTTTTGGAGTTTTTGCCATTGAAGTCATCACTGGAAGGAGGAATAATCACTTCTATCAAGATTCAACGTCCATCTTACAAAAGGTATGGAATTTGTATGGAGAGGGAAGGCTATATGCAGCTGTCGATCCTATATTAGCGGGTGATTATCCACGAGACGAAGCATCTCGGTTGCTTCAAATAGGTCTAGTTTGCGTGCAAGCCTTTGCTGATCTAAGGCCATCCATGTCGATGGTTGTGAAAATGCTTACAGCAAATTACGAGATTCCCCAGCCAAAACAGCCTCCATATCTTCATCCTTCAAGTGGAAACATAAAATCCCAAAATTCTTCAGACTCATCCAATCCCATTTTGTATTATAACTCGCGATCTTCGCAAAATAGCATGACCCAAAGCACAATCGACCCCAGATGA 1953 43.42 MKPYNFSFAIPFLLILLLFRLLIQSAADPRATEAALICSNNTASPPERSTFVSNFLDSMDAVTPLIASQRFAAVVNGTGNTSVYAFGECMNDLTQSDCDLCFAQMKTQILRCLPFQLATRGGRLFYDGCYVRYDYYNFFNESLSAVDRTVCGKSDYSGNRTIFSDNAMKLARNLSVVAPKNDGFAVGLVNLRNVSVYGLGQCWKFVKGTSCSKCLVDAAKEIGSCPPKTEGRVLNAGCYFRYSTERFYFNSTATATGGNGSRRLAVILASVSAAVAAALIISTVVFCARRRVVRKRKEKKQLGPLVAIVNKSKLNFSYETLERATNYFDQSNKLGQGGSGSVYKGTLSDGRVVAIKRLFFNTRQWVDHFFNEVNLISGIRHKNLVGLLGCSITGPESLLVYEYVPNQSLHDYLFGNKNVQPLSWESRFKIVLGTAEGLAYLHEESNVKIIHRDIKLSNILLDNDFTPKIADFGLARLLPEDKTHISTAIAGTLGYMAPEYVVRGKLSEKADVYSFGVFAIEVITGRRNNHFYQDSTSILQKVWNLYGEGRLYAAVDPILAGDYPRDEASRLLQIGLVCVQAFADLRPSMSMVVKMLTANYEIPQPKQPPYLHPSSGNIKSQNSSDSSNPILYYNSRSSQNSMTQSTIDPR 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38039352 38042978 - CrPI670011_05g027150.1 Cre05g2715 499228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2715 650 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Cre05g2715 650 Gene3D Transferase(Phosphotransferase) domain 1 404 607 - -
Cre05g2715 650 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 167 633 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cre05g2715 650 Pfam Salt stress response/antifungal 151 244 IPR002902 -
Cre05g2715 650 Pfam Salt stress response/antifungal 38 135 IPR002902 -
Cre05g2715 650 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524(InterPro)
Cre05g2715 650 SMART serkin_6 328 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g2715 650 Gene3D - 144 247 IPR038408 -
Cre05g2715 650 Gene3D - 32 138 IPR038408 -
Cre05g2715 650 CDD STKc_IRAK 334 597 - -
Cre05g2715 650 FunFam Cysteine-rich receptor-like protein kinase 2 294 403 - -
Cre05g2715 650 MobiDBLite consensus disorder prediction 606 650 - -
Cre05g2715 650 SUPERFAMILY Protein kinase-like (PK-like) 314 634 IPR011009 -
Cre05g2715 650 FunFam Cysteine-rich receptor-like protein kinase 3 147 247 - -
Cre05g2715 650 ProSiteProfiles Protein kinase domain profile. 328 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g2715 650 Gene3D Phosphorylase Kinase; domain 1 288 403 - -
Cre05g2715 650 MobiDBLite consensus disorder prediction 611 650 - -
Cre05g2715 650 FunFam Cysteine-rich receptor-like protein kinase 2 31 138 - -
Cre05g2715 650 FunFam Cysteine-rich receptor-like protein kinase 2 404 604 - -
Cre05g2715 650 Pfam Protein kinase domain 329 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g2715 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre05g2715 650 ProSiteProfiles Gnk2-homologous domain profile. 144 247 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2715 Cre-Chr5:38039352 Cre07g1399 Cre-Chr7:28896595 4.30E-78 dispersed
Cre03g1385 Cre-Chr3:25524757 Cre05g2715 Cre-Chr5:38039352 8.40E-48 transposed
Cre06g2261 Cre-Chr6:30521439 Cre05g2715 Cre-Chr5:38039352 5.80E-81 transposed
Cre10g1544 Cre-Chr10:29422633 Cre05g2715 Cre-Chr5:38039352 4.90E-154 wgd
Cre05g2715 Cre-Chr5:38039352 Cre08g1718 Cre-Chr8:29476673 4.00E-132 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64180 PF00069 Pkinase 2.20E-44 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2715 - - - 0.0