Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre05g2717 | ATGGAGGTCGACGGCGGAGCTACGGCGGCGGCTCAGCCGAGGAAATTCTCTCTCCCGGTGGACTCCGAACACAAATCCACCAAATTCAACATATTCTCCGTCGCAGCGCCGCACATGCGAACGTTTCATCTCTCGTGGATTTCCTTCTGCGCTTGTTTCATTTCCAGTTTCGCGGCGGCTCCTCTGCTTCCGGTGATCCGCGACAACCTCGATTTAACCGACACCGACATTGGAAACGCCGGAATCGCCTCCGTCTCCGGCGCCGTCTTCGCCCGAATCATGATGGGTTCCGCCTGCGACTTGGTCGGACCACGTCTCGCCTCCGCTTCCCTCATTCTCATAACCTCACCGGCGGTTTATTTAACCTCCATAGCTTCATCCCCTGTTTCGTTTCTCCTTGTCCGATTCTTCACCGGCTTCTCCCTCGCTACATTCGTCTCAACCCAATTCTGGATGAGTTCCATGTTCTCCTCCAACGTCGTCGGCACCGCCAACGGTGTCGCTGGCGGCTGGGGGAACCTAGGCGGCGGCGCAACACAGTTAATCATGCCGTATGTTTTCGCCATCATCGAACACATCGGCGCAACGAAATTCACCGCGTGGAGAATCGCTTTCTTCATCCCAGCGTTATTCCAAACGCTTTCCGCCTTCGCCGTTCTCCTCCTGGGCGAGGACACTCCTGACGGGAATTTCCGGCGGCTGCAGAAAACAGGGGAGAAGGCGAAAGACGAATTATCGAAAGTTGTGTTGAATGGGGTGAAGAATTACAGGGGATGGATTCTGGCATTGACTTATGGGTATAGTTTCGGAGTGGAATTGACGATTGATAATGTAATAGCGAATTACTTTTACGATAGGTTTAATTTGAATCTGCACACGGCGGGGATAGTGGCGGCGAGTTTTGGGCTGGCGAATCTGTTTTCGAGGCCTTACGGCGGAGTATTGTCGGATGTGGTGGGGAAAAGATTTGGAATGAGAGGGAGGCTGTGGGCTTTGTGGTTGGTGCAAACAATTGGGGGAATTTTGTGTGTGATTCTTGGGTTGGTTAATTCTTTGAGTGCTTCGATTGCCATTATGATCGTTTTTTCAGTGTTTGTTCAAGCTGCTTGTGGACTTACTTTTGGTGTTGTTCCTTTCGTCTCTCGAAGGTCATTAGGAGTAATATCGGGGATGACAGGTGGGGGCGGGAATGTGGGGTCGGTGCTGACTCAGCTGATATTCTTCAGAGGCAACAGATACACAAAAGAGAGAGGAATAAGTCTAATGGGAGTGATGATAATAGCTTGCACTCTCCCAATTGCATTGATTTATTTTCCTCAATGGGGCAGTATGTTCTTTGGGCCTTCCTCCAAAATTGCTTCTGAGGAAGACTATTACTTGTCGGAATGGACTTCTGAGGAGAAGTCCAAAGGCTTCCATATGGCTAGCCTTAAGTTTGCTGAGAATAGTCGAACTGAAAGAGGCAAAAGCTTTAAGGGAACTGCTGATGCTGATCTTGCCTCACCTAATGTTTAA | 1515 | 50.23 | MEVDGGATAAAQPRKFSLPVDSEHKSTKFNIFSVAAPHMRTFHLSWISFCACFISSFAAAPLLPVIRDNLDLTDTDIGNAGIASVSGAVFARIMMGSACDLVGPRLASASLILITSPAVYLTSIASSPVSFLLVRFFTGFSLATFVSTQFWMSSMFSSNVVGTANGVAGGWGNLGGGATQLIMPYVFAIIEHIGATKFTAWRIAFFIPALFQTLSAFAVLLLGEDTPDGNFRRLQKTGEKAKDELSKVVLNGVKNYRGWILALTYGYSFGVELTIDNVIANYFYDRFNLNLHTAGIVAASFGLANLFSRPYGGVLSDVVGKRFGMRGRLWALWLVQTIGGILCVILGLVNSLSASIAIMIVFSVFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNVGSVLTQLIFFRGNRYTKERGISLMGVMIIACTLPIALIYFPQWGSMFFGPSSKIASEEDYYLSEWTSEEKSKGFHMASLKFAENSRTERGKSFKGTADADLASPNV | 504 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 38057466 | 38059949 | - | CrPI670011_05g027170.1 | Cre05g2717 | 499230 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre05g2717 | 504 | SUPERFAMILY | MFS general substrate transporter | 36 | 438 | IPR036259 | - | |
Cre05g2717 | 504 | PANTHER | HIGH-AFFINITY NITRATE TRANSPORTER 2.3 | 11 | 489 | IPR044772 | GO:0005886(PANTHER)|GO:0015112(PANTHER)|GO:0015112(InterPro)|GO:0015706(PANTHER)|GO:0071249(PANTHER) | |
Cre05g2717 | 504 | Gene3D | MFS general substrate transporter like domains | 35 | 231 | IPR036259 | - | |
Cre05g2717 | 504 | MobiDBLite | consensus disorder prediction | 484 | 504 | - | - | |
Cre05g2717 | 504 | Pfam | Major Facilitator Superfamily | 46 | 402 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cre05g2717 | 504 | CDD | MFS_NRT2_like | 42 | 435 | IPR044772 | GO:0015112(InterPro) | |
Cre05g2717 | 504 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 41 | 442 | IPR020846 | GO:0022857(InterPro) | |
Cre05g2717 | 504 | FunFam | High affinity nitrate transporter 2.5 | 34 | 230 | - | - | |
Cre05g2717 | 504 | Gene3D | MFS general substrate transporter like domains | 240 | 443 | IPR036259 | - | |
Cre05g2717 | 504 | FunFam | Nitrate transporter 2.1 | 242 | 443 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g0578 | Cre-Chr3:4501832 | Cre05g2717 | Cre-Chr5:38057466 | 5.90E-174 | dispersed | |
Cre03g0579 | Cre-Chr3:4515465 | Cre05g2717 | Cre-Chr5:38057466 | 5.90E-174 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre05g2717 | K02575 | - | csv:101212365 | 860.907 |