Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre05g2795 | ATGGACATTCCTTCTATAATCGTAAATGCTTTGTTTATTTTTGCATTCTTGATGTGGGTTTTGCTTAACTCGTGTAAACGAGAGGTAGAGAGTGATTCCCTTCAGTCGAGAGACAGAGCATTTCGAGAGTTTAAATCGGTAATCAGCATTACTATATTTTGTAATGCTGTTATTCCATTTTGGAATTCCGGGTTTGTTGCGTATCAGTACTGGAATCATGGAATCGTTTGTGGGGAATCAGCAATTTCTGCTTTAACGTGGATTTTGGCTGCTGCGATTGCTTTTTACTGGAGAAATGGAATGTATTATCAAGGCAAAAAATGGCCGTTGATTCTAATTGTTTGGTGGGTTTTCTCGTGTGTTTATGGGTTATGTTCTTCGATTATTTACCTGCTGACCCACTTGAAATCTATGGAGTTTCCTCATTTTCTTCCAAAAGCTACTATTGTAGATTTTGCTTCATTCACTTTGTCTTTGATTATCTGTTGTACGGCACTGACTGTTAACTATTCCAAGAAACATAATGATCTTGAGAAGTCATTGCTCCAAAAAGACGATGATTGTTCTTCTGAAAATGATGGTGGTTTCATCAGTCCTGGATTATGGAGTCGAATTACATTCCAATGGCTGAATCCTCTCTTCAAAAGGGGGAGGAATCAGAAACTTGAATTAGCTCATGTTCCTTGTGTACCTCAACCTGAAACAGCTGAATATGCTTCTTCATTGCTAGAAGAATCACTTCAGAGAAAGAAAGTTGAATCTTCTTCCTTGCCCAAAGCTATAGTTCTAGCCACATGGAAATTTCTGGTCTTAACTGCAATTTTTGCAGGATTCAACACATTCGCATCCTTTATGGGGCCTTTCCTAATCACCAACTTTGTGAATTATCTGTTGGGAAAAAGTGATGACTCAAGCAACCGTGATGGGTTGATTCTTGCATTCTTCTTCTTCTTTGCTAAGACATTGGAGTCTCTTACCCAAAGACAATGGTATTTTGGCACTCACCGTGTCGGTATACAGGTAAGGGCAGCTCTTACAGTGATGATCTACAAGAAATCTATATCTATTAATGCTGCTGGTCCAAGTAATGGTAAAATCATAAATCTAATAAATGTGGATGTTGAAAGAATTGGAGACTTCTCGTGGTATATTCACAAGATTTGGTTGCTTCCTGTTCAAATAGCTCTAGCCCTTATCATCCTTTACAGGAATCTTGGAGCTGCTCCTTCCATTACTGCTCTTTTAGCCACAATATTTATAATGGTGAGCAACACACCTTTGGCCAATGTTCAAGAAAGTCTACACTCAAAGATAATGGATGCAAAGGACTCTAGAATCAAATTGACATCAGAGACTCTAAAGAACATGAGAGTCTTGAAACTGCATTCTTGGGAACAGACATTTTTGAAGAAGGTCTTGAAACTTCGAGAAGTTGAAAGAAGCTGGTTGAAGAGATACCTCTATACGTGCTCCGTTATAGCATTTCTCTTTTGGGTTTCACCAACTTTAGTTTCAGTAGTTACTTTTGGCACCTGTGTTATGATGAAAATCCCTCTAACAGCAGGCACAGTTCTATCAGCCATTGCTACTTTTCGTATCCTACAAGAGCCAATTTATAACCTACCAGAGCTAATTTCCATGATCGCTCAAACAAAAGTTTCCCTTGACCGTATACAAGAGTTCATTCGAGAAGAAGACCAAAGGAAGCAGATTTATTATCCTCCTTCCAATGCATCAGATGTCGCGATTGAAATCGAGGTGGGGGAGTATTCGTGGGAAGCTAGTGATCTAAATTTTAAGAAACCAACTATAAAAGTTGCAGAGAAGATGCAAATACCAAAGGGTTACAAGGTTGCAGTCTGTGGATCAGTTGGTTCAGGAAAATCAAGCCTACTTTGTAGTATACTGGGTGAGATCCCACAGGTTTCAGGAACACAAATGAAAGTACATGGAACTAAAGCTTATGTTCCCCAAAGTGCTTGGATCCAATCAGGCACTGTAAGAGAGAATGTGCTGTTTGGGAAAGAGATTGACAAACATTTTTATGAGGATGTGTTAGAAGCCTGTGCTTTGAATCAGGATATCAAGTTGTGGCTGGATGGAGATTGTACTTTGTTGGGAGAGAGGGGGTTGAACTTAAGTGGAGGGCAAAAGCAGAGGATTCAATTGGCAAGGGCAGTCTATAGTGATGCAGATGTTTATTTCCTGGACGATCCTTTTAGTGCTGTGGACGCATGTACCGGAACACATTTGTTCAAGAGATGTCTTTTGCAACTTCTGTCTGGTAAAACTGTGGTATATGCTACTCATCACTTGGAATTCATCGAAGCTGCAGATCTTGTTCTGGTGATGAAAAATGGTCATATTGTTCAATCAGGAAAGTATGCAGAATTAATGTCAGACTCAAACGGTGAACTTTCTAGGCACATTGCAGCTCATAGAAGATCATTGAATGGAGTTAAGCCATTCAAAGAAGATAAACCCCATCATAAAAGACCATGTAAGACACATCAGATAGAAGCTCTAGATGAAAATTTTTCACTATCCCTTGGGAATGTTGGCCACTCTGTAAGAACTCAAGAAGAGGAAACTCAAACCGGTCGTGTAAAGTGGAGTGTCTACTCAACCTTCATCACATCTGCTTATAAAGGAGCTCTTGTTCCTGTAATCCTTCTATGTCAAGTATTGTTTCAAATCCTTCAGATGGGCAGTAATTACTGGATTTCTTGGGCAACAGAAGTAGAAGGCAAGGTCAGCAGAGAGCAGTTGTTAGGGATCTTCGTTTTGATGTCCGGTGGGAGCTCCATCTTTATATTAGGCCGGGCCGTTTTGATGGCAACCATTGCTATTGAGACTGCACAAAGAATGTTTCTTGGAATGGTGACATCAATATTTGCAGCACCTATTTCATTTTTTGATGCCAAACCTTCAAGCCAAATCCTTAACAGGTCTTCTACTGATCAAGGCACCTTGGATACAGATATCCCTTATAGATTAGGAGGATTGGCTTTTGCACTCATTCAGCTGTTGAGTATCATCATCCTGATGTCCAAGGTTGCATGGCAAGTTTTCCCCCTCTTCCTTGTCGTCCTTGCTATCTCTATATGGTATCAGGGATATTACATCAGTACTGCTAGAGAACTAGCTAGAATGGTCGGGATTCGGAAGGCTCCAATTCTTCATCACTTTTCTGAAACAGTCGTAGGTGCAACAATTATCCGTTGTTTCAATCAAGAGGACCGTTTCTTGACAAAAATACTGAAGCTGGTTGATGATTATTCTCGTGTGGTTTTTCATAACTCAACTTCAATGGAATGGTTGTGCCTGCGGATCAATTTTCTTTTCGATGTTGTCTTCTTTCTCGCCCTTACCATCTTAGTGACCCTTCCTAGAACGGCAATTGATCCAAGCTTAGCAGGATTAGCAGCTACATATGGTTTGAACATGAATGTGCTTCAGGCTTGGGTAATATGGAATTTATGCAATGTGGAGAACAAAATGATATCTGTTGAGAGGATTCTTCAGTTTACTAACATTGCTTCTGAGGCGCCACTGGTTATCGAAGATTGTAGGCCAATGCCAGAATGGCCAAAGGAGGGAAAGATAGAACTTGAAAACCTTCATGTCCAATACCGTCCTAATCTTCCAGTGGTTCTCAAAGGGATCACTTGTACCTTCCCAAAAAAGAAGAAAATTGGAGTTGTTGGCAGGACAGGAAGTGGAAAATCCACCTTAATCCAAGCACTTTTTAGAGTGGTAGAGCCTTCTGCAGGAAGGATTCTCATTGATGGAGTTGACATTTGCAAAATTGGTCTACATGATCTGAGGTCCAAGTTGGGTATTATTCCACAAGACCCAACATTGTTCCAAGGAACCATGAGAACTAACCTAGACCCTTTGCAGCAACATACTGATCCAGAAATATGGGAGGTCCTTCACAAGTGTCGTTTTGCCGAGATCATCCGAACGGACCACGTGGTTCTTGAAGCACCAGTGGCTGAAGATGGAGAGAATTGGAGTGTGGGACAGCGGCAACTTGTTTGTCTGGCCAGAGTGCTCCTCAAAAAACGTAGGATTCTTGTGTTGGATGAGGCAACAGCTTCCATTGATACTGCAACAGAAAATATAATTCAGGAAACAATAAGAGAGGAGACTAATGGTTGTACCGTCATTACTGTGGCTCATCGAATACCAACAATTATCGATAACGATTTGGTTTTGGTTCTTGATGAAGGCAAGGTAATCGAGTACGATTCACCATCTCGATTACTCGAGAACAGTTCTTCTATGTTTTCAAAGTTGGTGACGGAATTCTTGAGTAGATCATCCAATAGTCACTCACAATCTATGGGGACTTTTATAACAACTGATAGATGCTTCATATTATTATTCCAATGGTCCATCCTCCTCGGAACCGGAGCACAGAATTCTCTGAAACCTACTCTCCTCCCTTGCCGTCGCCGACAACTCGCTTCGAAGACTCGAAGTTGTTTCTATCGTTGCAGAAGAAGAAGAAGGAAGATAGATACCTGCATTACATTCCTTGAAAGTGCACTACGACTTCCACAGGTGGGTAGCAGCGAGGATGAGGTTTTTCAGTGTCTTTTGCACGATCCAGTGTGTAACAGAATACAGTTCTCCCATGAAATTGTTTACAAGTTGCTCCAACGATTCAAAGATGATTGGAAATCTGCTTTGGGTGTCTTTAGATGGGCAGAGTCACTCTCTGGATTCAAGCACACACCAGATTTATATGACATTTTAATAGATACATTAGGCAAAACAAAGCAAATGGCCAAGATGAAAAGTATGCTAGAAGAAATGAAGGAAGCTCGCCTTGTGAGACTTGATACTGTAGCTAAGGCTATGCGAAGGTTTGCTGGTGCTGGACAATGGAAAGATGCTGTTAGGATATTTGATGATTTGGAAACTTTTGGGTTGGAGAAGAACACTGAATCTATGAATGTGTTGCTTGATACTCTGTGCAAAGAGAAGAAGGTCGAGCAAGCTCGACAGATATATTTGGAACTCAAATCACATATTCCCCCGAATGCCAACACATTTAACATGTTCATTCATGGTTGGTGTAAAGTTGATAGGGTTGATGAGGCACATTGGACATTACAAGAGATGAAAGGGCATGGTTATCGTCCTTGTGTTATTAGTTATTCGACAATTATTCTATTTTATTGTCATCATTATAACTTTAGTAAGGTTTATGAGTTGCTTGATGAAATGGATGCTCAAGGATGCCCAGCAAATGTCATCACTTACACCACCATCATATGCTCACTAACAAAGTCGGACGAATTCGAGGAAGCCTTGCAAATTGCTGAGAGAATGAAATCTGCTGGATGTGAACTCGATACAGTTTTTTATAATTGTTTGATCCATACATTAGGAAGAGCGGGTAAAGTAGGGGAAGCTATTCATGTATTCGAAGTAGAAATGCCAAGCAAGCGTGTTTTACCAAATACATCAACCTACAATTCTATGATTTCCATGTACTGTCATCGTGCGCAAGAACAAAAGGCTATGAAACTGCTTGAGGAGATGGAGAAAACAGGGCTTTGTAAACCTGATGTCCAGACATATTACCCATTGCTTAAATCCTGTTTTAGAACTGGAAAGACAGACTATGTTCTGAGCAAGTTATTGGATGAGATGATAAATAAACATCATCTGAGCCTTGATATATCAACCTATTCCCTTCTAATTCATGGTCTTTGTAGAGCAAATAAGTGTGAGTGGGCTTACCAGTTATTTGAGAAGATGATTAGTCAAGATATAAAGCCGAGATACCTCACATGTCAACTGCTTTTGGATGAAGTTAAGCAGAAGAATATGGGTGAAGTTGCTGATAGGATTGAAGATATCATGAAGAACTTGTGA | 5892 | 40.36 | MDIPSIIVNALFIFAFLMWVLLNSCKREVESDSLQSRDRAFREFKSVISITIFCNAVIPFWNSGFVAYQYWNHGIVCGESAISALTWILAAAIAFYWRNGMYYQGKKWPLILIVWWVFSCVYGLCSSIIYLLTHLKSMEFPHFLPKATIVDFASFTLSLIICCTALTVNYSKKHNDLEKSLLQKDDDCSSENDGGFISPGLWSRITFQWLNPLFKRGRNQKLELAHVPCVPQPETAEYASSLLEESLQRKKVESSSLPKAIVLATWKFLVLTAIFAGFNTFASFMGPFLITNFVNYLLGKSDDSSNRDGLILAFFFFFAKTLESLTQRQWYFGTHRVGIQVRAALTVMIYKKSISINAAGPSNGKIINLINVDVERIGDFSWYIHKIWLLPVQIALALIILYRNLGAAPSITALLATIFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSWEQTFLKKVLKLREVERSWLKRYLYTCSVIAFLFWVSPTLVSVVTFGTCVMMKIPLTAGTVLSAIATFRILQEPIYNLPELISMIAQTKVSLDRIQEFIREEDQRKQIYYPPSNASDVAIEIEVGEYSWEASDLNFKKPTIKVAEKMQIPKGYKVAVCGSVGSGKSSLLCSILGEIPQVSGTQMKVHGTKAYVPQSAWIQSGTVRENVLFGKEIDKHFYEDVLEACALNQDIKLWLDGDCTLLGERGLNLSGGQKQRIQLARAVYSDADVYFLDDPFSAVDACTGTHLFKRCLLQLLSGKTVVYATHHLEFIEAADLVLVMKNGHIVQSGKYAELMSDSNGELSRHIAAHRRSLNGVKPFKEDKPHHKRPCKTHQIEALDENFSLSLGNVGHSVRTQEEETQTGRVKWSVYSTFITSAYKGALVPVILLCQVLFQILQMGSNYWISWATEVEGKVSREQLLGIFVLMSGGSSIFILGRAVLMATIAIETAQRMFLGMVTSIFAAPISFFDAKPSSQILNRSSTDQGTLDTDIPYRLGGLAFALIQLLSIIILMSKVAWQVFPLFLVVLAISIWYQGYYISTARELARMVGIRKAPILHHFSETVVGATIIRCFNQEDRFLTKILKLVDDYSRVVFHNSTSMEWLCLRINFLFDVVFFLALTILVTLPRTAIDPSLAGLAATYGLNMNVLQAWVIWNLCNVENKMISVERILQFTNIASEAPLVIEDCRPMPEWPKEGKIELENLHVQYRPNLPVVLKGITCTFPKKKKIGVVGRTGSGKSTLIQALFRVVEPSAGRILIDGVDICKIGLHDLRSKLGIIPQDPTLFQGTMRTNLDPLQQHTDPEIWEVLHKCRFAEIIRTDHVVLEAPVAEDGENWSVGQRQLVCLARVLLKKRRILVLDEATASIDTATENIIQETIREETNGCTVITVAHRIPTIIDNDLVLVLDEGKVIEYDSPSRLLENSSSMFSKLVTEFLSRSSNSHSQSMGTFITTDRCFILLFQWSILLGTGAQNSLKPTLLPCRRRQLASKTRSCFYRCRRRRRKIDTCITFLESALRLPQVGSSEDEVFQCLLHDPVCNRIQFSHEIVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQMAKMKSMLEEMKEARLVRLDTVAKAMRRFAGAGQWKDAVRIFDDLETFGLEKNTESMNVLLDTLCKEKKVEQARQIYLELKSHIPPNANTFNMFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVISYSTIILFYCHHYNFSKVYELLDEMDAQGCPANVITYTTIICSLTKSDEFEEALQIAERMKSAGCELDTVFYNCLIHTLGRAGKVGEAIHVFEVEMPSKRVLPNTSTYNSMISMYCHRAQEQKAMKLLEEMEKTGLCKPDVQTYYPLLKSCFRTGKTDYVLSKLLDEMINKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMISQDIKPRYLTCQLLLDEVKQKNMGEVADRIEDIMKNL | 1963 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 38662581 | 38673209 | + | CrPI670011_05g027950.1 | Cre05g2795 | 499308 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre05g2795 | 1963 | SMART | AAA_5 | 1228 | 1419 | IPR003593 | GO:0016887(InterPro) | |
| Cre05g2795 | 1963 | SMART | AAA_5 | 614 | 788 | IPR003593 | GO:0016887(InterPro) | |
| Cre05g2795 | 1963 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1202 | 1436 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cre05g2795 | 1963 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 585 | 811 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cre05g2795 | 1963 | SUPERFAMILY | ABC transporter transmembrane region | 888 | 1184 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cre05g2795 | 1963 | CDD | ABCC_MRP_domain2 | 1200 | 1420 | - | - | |
| Cre05g2795 | 1963 | Gene3D | - | 1185 | 1438 | IPR027417 | - | |
| Cre05g2795 | 1963 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1754 | 1788 | IPR002885 | - | |
| Cre05g2795 | 1963 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 889 | 1165 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cre05g2795 | 1963 | CDD | ABCC_MRP_domain1 | 583 | 787 | - | - | |
| Cre05g2795 | 1963 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 199 | 1435 | IPR050173 | GO:0016020(PANTHER)|GO:0042626(PANTHER)|GO:0055085(PANTHER) | |
| Cre05g2795 | 1963 | ProSitePatterns | ABC transporters family signature. | 713 | 727 | IPR017871 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cre05g2795 | 1963 | Pfam | ABC transporter | 610 | 740 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cre05g2795 | 1963 | NCBIfam | pentatricopeptide repeat | 1687 | 1718 | IPR002885 | - | |
| Cre05g2795 | 1963 | NCBIfam | pentatricopeptide repeat | 1901 | 1932 | IPR002885 | - | |
| Cre05g2795 | 1963 | NCBIfam | pentatricopeptide repeat | 1792 | 1826 | IPR002885 | - | |
| Cre05g2795 | 1963 | NCBIfam | pentatricopeptide repeat | 1721 | 1754 | IPR002885 | - | |
| Cre05g2795 | 1963 | NCBIfam | pentatricopeptide repeat | 1756 | 1790 | IPR002885 | - | |
| Cre05g2795 | 1963 | NCBIfam | pentatricopeptide repeat | 1585 | 1614 | IPR002885 | - | |
| Cre05g2795 | 1963 | NCBIfam | pentatricopeptide repeat | 1828 | 1861 | IPR002885 | - | |
| Cre05g2795 | 1963 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1789 | 1824 | IPR002885 | - | |
| Cre05g2795 | 1963 | FunFam | ABC transporter C family member 5 | 570 | 821 | - | - | |
| Cre05g2795 | 1963 | CDD | ABC_6TM_ABCC_D1 | 271 | 558 | IPR044746 | GO:0140359(InterPro) | |
| Cre05g2795 | 1963 | Gene3D | Tetratricopeptide repeat domain | 1817 | 1962 | IPR011990 | GO:0005515(InterPro) | |
| Cre05g2795 | 1963 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1898 | 1932 | IPR002885 | - | |
| Cre05g2795 | 1963 | Gene3D | - | 565 | 823 | IPR027417 | - | |
| Cre05g2795 | 1963 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 270 | 550 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cre05g2795 | 1963 | Gene3D | Tetratricopeptide repeat domain | 1679 | 1750 | IPR011990 | GO:0005515(InterPro) | |
| Cre05g2795 | 1963 | Pfam | ABC transporter | 1219 | 1367 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cre05g2795 | 1963 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 609 | 802 | IPR027417 | - | |
| Cre05g2795 | 1963 | Pfam | PPR repeat | 1895 | 1925 | IPR002885 | - | |
| Cre05g2795 | 1963 | Pfam | PPR repeat | 1785 | 1814 | IPR002885 | - | |
| Cre05g2795 | 1963 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1650 | 1680 | IPR002885 | - | |
| Cre05g2795 | 1963 | FunFam | ABC transporter C family member 3 | 1185 | 1437 | - | - | |
| Cre05g2795 | 1963 | FunFam | ABC transporter C family member 5 | 852 | 1183 | - | - | |
| Cre05g2795 | 1963 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1825 | 1859 | IPR002885 | - | |
| Cre05g2795 | 1963 | FunFam | ABC transporter C family member 10 | 253 | 566 | - | - | |
| Cre05g2795 | 1963 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1684 | 1718 | IPR002885 | - | |
| Cre05g2795 | 1963 | Gene3D | Tetratricopeptide repeat domain | 1751 | 1816 | IPR011990 | GO:0005515(InterPro) | |
| Cre05g2795 | 1963 | Gene3D | Tetratricopeptide repeat domain | 1542 | 1678 | IPR011990 | GO:0005515(InterPro) | |
| Cre05g2795 | 1963 | Pfam | ABC transporter transmembrane region | 890 | 1129 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cre05g2795 | 1963 | Pfam | ABC transporter transmembrane region | 271 | 537 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cre05g2795 | 1963 | Gene3D | ABC transporter type 1, transmembrane domain | 853 | 1183 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cre05g2795 | 1963 | Gene3D | ABC transporter type 1, transmembrane domain | 245 | 564 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cre05g2795 | 1963 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1719 | 1753 | IPR002885 | - | |
| Cre05g2795 | 1963 | Pfam | PPR repeat family | 1718 | 1766 | IPR002885 | - | |
| Cre05g2795 | 1963 | Pfam | PPR repeat family | 1824 | 1873 | IPR002885 | - | |
| Cre05g2795 | 1963 | Pfam | PPR repeat family | 1650 | 1697 | IPR002885 | - | |
| Cre05g2795 | 1963 | SUPERFAMILY | ABC transporter transmembrane region | 265 | 566 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cre05g2795 | 1963 | CDD | ABC_6TM_ABCC_D2 | 887 | 1177 | IPR044726 | GO:0140359(InterPro) | |
| Cre05g2795 | 1963 | Pfam | PPR repeat | 1585 | 1611 | IPR002885 | - | |
| Cre05g2795 | 1963 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1193 | 1431 | IPR027417 | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre05g2795 | - | - | - | - | 0.0 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g2795 | Cre-Chr5:38662581 | Cre06g0907 | Cre-Chr6:2484163 | 0.00E+00 | dispersed | |
| Cre05g2795 | Cre-Chr5:38662581 | Cre05g0358 | Cre-Chr5:3268146 | 0.00E+00 | transposed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi1g1144 | . | . | . | . | . | Bpe10g00778 | . | Bma15g00243 | . | . | . | . | . | Car18g00665 | Sed06g0134 | Cpe09g00570 | . | Bhi07g01872 | Tan04g0097 | Cmetu10g0012 | Lac13g0085 | Hepe10g1542 | . | . | Cla05g02634 | Cam05g2827 | . | Cco05g2896 | Clacu05g2832 | Cmu05g2679 | Cre05g2795 | . | Cone19ag1108 | . | . | Lsi04g00655 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0006115 | 0 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 1 | 38 |