Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2817 ATGGCGCCCTCCTTTGATTGGTGGGGAAAAGACACTCATAGAGGAACCCCTGTTGTTGTCAAGATGGAGAATCCTAATTGGTCGATGGTTGAGTTGGAGGGTCCGTCGGAGGATGATTTTCTCATCGCTAGTGAGTCGTCGCCGACGGGTCGGACCAGAGATAAAGGCAGAGGCAAAAACGCTAAGCAACTCACGTGGGTTCTCCTCCTCAAAGCCCACAGGGCCGCTGGTTGTTTAACTTCCATTGGCTCTGCAATGGTGGACCTCGCCGCCGCCGTTAGACGCCGTGTTGCTTCTGGACGGACTGATGAGGACGACGCCGACAATGACGTCACTGTTGGAGGTAGAGAGAAAGAGAACCCGACTGTGAAAACCAGGTTCTATTCTTGTATCAAGGTGTTTCTATGGCTGTCGGTGCTTCTGTTGGGTTTTGAGATTGCGGCCTTCTTCAAGGGCTGGCATTTTGGTACTCCAAATCTTCAATTGGATTACCTTTGGGCATCGCCTTGGGGTTTCAAAGGAGCTTTTGGTCGGATTTACTCTCAGTGGGTATTGATTCGAGTGGACTATTTAGCTCCACCTCTACAGTTCTTAGCCAATGCCTGTATCATACTGTTCATCATTCAGAGCTTGGATCGTTTAATCTTATGTTTGGGTTGTTTCTGGATCCGGTTCAAGAAAATCCAACCAGTTCTTAAACCTGGAGATGAAGACCTTGAATCCGGTGAAAAGGGCTATTTCCCAATGGTTCTTGTTCAGATCCCCATGTGCAATGAAAAAGAGGTTTATCAGCAATCAATTGCTGCTATCTGCAACTTGGACTGGCCAAGAACTAAGCTGCTGATTCAAGTTCTTGATGATTCTGATGATCCAACTACCCAGTTGTTGATTAAAGAGGAGGTTCTTAAATGGCAGCAAGAGGGTGCCAACATTATTTATCGTCATCGGGTCATTAGAGATGGTTATAAGGCTGGCAACCTCAAATCCGCCATGAATTGTAGCTATGTCAAAGATTACGAATTCGTTGCCATTTTCGATGCCGATTTTCAACCCACACCTGATTTCCTTAAAAGAACTGTTCCGCATTTCAAGGACAATGAAGAGCTGGGGCTGGTTCAAGCTAGGTGGTCTTTTGTGAACAGGGATGAGAACTTGCTAACTAGGCTGCAGAACATCAATTTAGCTTTCCATTTTGAAGTAGAGCAGCAAGTGAACAGTGTCTTCCTCAACTTCTTTGGATTCAATGGCACTGCTGGTGTGTGGAGGATCAAAGCTCTCGAGGATGCCGGTGGGTGGTTAGAAAGGACCACCGTCGAGGACATGGATATCGCTGTTCGTGCTCATCTTCATGGATGGAAATTCATATTCCTAAATGATGTTGAGTGCCAGTGTGAGCTACCAGAATCTTATGAAGCTTATAGAAAACAACAACATAGATGGCATTCTGGCCCAATGCAATTGTTTCGCCTTTGTTTGCCTGCTATTATTCGATCAAAGATTAGTGTATGGAAGAAGTTCAACTTGATCTTCCTCTTCTTTTTGCTCAGAAAATTGATACTGCCCTTCTATTCCTTCACACTTTTCTGCATAATTCTACCTATGACAATGTTTGTTCCCGAGGCCGAGCTACCCGCTTGGGTCGTTTGCTATATCCCGGCCACCATGTCATTTCTAAACATCCTGCCTGCCCCAAAATCCTTCCCTTTCATTGTCCCTTACCTCCTTTTTGAGAACACCATGTCAGTCACCAAGTTCAATGCCATGATCTCAGGCCTCTTCCAGCTTGGTAGTGCCTACGAATGGGTTGTTACAAAGAAATCTGGCCGTTCCTCGGAGGGCGATCTCGTCTCCTTGGTAGAGAGAGAGCAAAAGCATCAGAGAGGAGCTTCAGCGCCCGACCTAGAAGAAATGAAGGAAGAAATTCAGAAGCAAGAGAAGAAAGCTTCTTTGCGAAAGAAGCACAACAGAATATACACGAAAGAGCTGGCATTAGCTTTCCTCCTCCTAACCGCATCGGCACGGAGCCTTCTGTCTGCACAAGGGATCCATTTCTACTTCTTGCTATTCCAGGGGATCTCGTTCCTGCTTGTCGGTTTGGACTTGATCGGCGAACAGATAGGTTGA 2124 46.28 MAPSFDWWGKDTHRGTPVVVKMENPNWSMVELEGPSEDDFLIASESSPTGRTRDKGRGKNAKQLTWVLLLKAHRAAGCLTSIGSAMVDLAAAVRRRVASGRTDEDDADNDVTVGGREKENPTVKTRFYSCIKVFLWLSVLLLGFEIAAFFKGWHFGTPNLQLDYLWASPWGFKGAFGRIYSQWVLIRVDYLAPPLQFLANACIILFIIQSLDRLILCLGCFWIRFKKIQPVLKPGDEDLESGEKGYFPMVLVQIPMCNEKEVYQQSIAAICNLDWPRTKLLIQVLDDSDDPTTQLLIKEEVLKWQQEGANIIYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNRDENLLTRLQNINLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISVWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEREQKHQRGASAPDLEEMKEEIQKQEKKASLRKKHNRIYTKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQIG 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38873741 38876228 + CrPI670011_05g028170.1 Cre05g2817 499330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2817 707 Coils Coil 634 654 - -
Cre05g2817 707 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 240 465 IPR029044 -
Cre05g2817 707 Pfam Glycosyl transferase family group 2 342 548 IPR001173 -
Cre05g2817 707 SUPERFAMILY Nucleotide-diphospho-sugar transferases 250 527 IPR029044 -
Cre05g2817 707 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 177 705 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Cre05g2817 707 FunFam probable xyloglucan glycosyltransferase 5 241 466 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2806 Cre-Chr5:38791771 Cre05g2817 Cre-Chr5:38873741 3.40E-262 dispersed
Cre05g2817 Cre-Chr5:38873741 Cre08g1618 Cre-Chr8:28662765 0.00E+00 dispersed
Cre05g2817 Cre-Chr5:38873741 Cre02g2494 Cre-Chr2:38211602 7.90E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2817 - - - 0.0