Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre05g2864 | ATGGATCAATTTTCCAAAGACCTGGACAAGGAAATCTGCAACGCGGAGAAATTTGAGAGAGAAGAAGAAGACGACGACGGCGACGAGGAGCAAGAAGAGGGACAAGACGACTGGGACGATTGGAATGCAGACGAGGAAGAAGGAGAAGAAGCATTTGATTCGAATTTTCTGTGTCTGTTCTGCAACTCAAAGTATAATCACTGCGACACTCTGTTCAACCATTGCAACTCCGTCCACTATTTCGATTTTCACAGCATCAGAAGGGCTCTGGGTTTAGACTTCTATGGTTCCTTCAAAATTATCAACTACATACGATCTCAGGTAGCAGATAATAGGTGCTGGAGCTGTGGTCTCTCGTGTAAATCAAACCAGGATTTACAGAACCATTTACACAAAATTTTAAATCTCGATGACATAAAGGCTCTTTGGGATGATGATAAATATCTAAAACCCTTCAGGCAAGATGATCCCCTCCTGTACAGTTTTACAGAAGACGAGGAGGATGATGATGAAATGACTAGAGAAAATCTTCCATTTCATCCAAACCAAAACAAAGAAAATGGAGTGGAAGATTGTAGTTCTACTTCACATGATTATTTGAATGCTCCAAGCAACTTAGAGGGCGAGATTGAGAATACTGTGAAAACCACGGAGACTTTGGGGTTGAAAGATGAAATGCAGGAAGACATTCAATTTAAATTAGCCAGACGGAATTTTGATAGAAAGGATATAAAAAATGCAAATGAAAGTTACTTCGGTTCATATAGCTCTTTTGGCATACACAAAGAGATGTTAAGCGACAAGGTCAGAATGGAAGCTTATATGGAGGCGATTTTGCAAAATCCATCTCTGTTCCACAATGCTGCCGTGATGGATGTAGGCTGTGGAACAGGCATACTTAGTCTTTTTGCTGCAAAAGCAGGTGCATCAAGAGTTATTGCAGTTGAAGCGAGTGAAAAGATGGCAGCAGTGGCCACCCAAATTGCAAAAGACAATGGCCTCTGGTGGAACAGGAAACAAACTAGAGATTGTGACATGTCAAGTGGGACTATAGAAGTGGTTCATGGTATGGTAGAAGAACTCGATAAGAACATAGAGATTGCGCCTCACAGTGTTGACGTATTATTGAGTGAATGGATGGGCTATTGCTTGTTATACGAATCAATGCTCAGCTCAGTACTCTTTGCAAGGGATCGGTGGTTGAAGCCTGGAGGTGCAATCTTACCAGATACAGCCACAATTCTTGTTGCTGGATTTGGAGTTGGTGGAACTAGTCTTCCATTTTGGGAAAATGTGTATGGTTTTAGAATGTCTTGTGTAGGGAAGGAACTTGTAAAAGATGCTGCCAACACTCCCATTGTTGATATTGTGGATGCTAATGATTTAGTAACTAGTCCTGCAATCCTCCATACTTTCGATCTAGCAACCATGCATCCTGATGAAGTAGACTTCACTGCAAGTACCGAGTTGGAACCAAATTCACATGATCCTTCAAACTCAAATAGTGTTGAAGTTGAAGCATCTCGGTGTCATGGAGTTGTCCTATGGTTTGAAACTGGTTTTACAAGCAGATTTTGCAAGGAATCACCGGCTGTTCTGTCTACATCTCCATACACTCCCAAAACTCACTGGTCTCAAACCATATTAACCTTCAGAGAGCCGGTTGCTATAACATCTAGAAAGTCAAGAACCAACATATCAGCACCAGTAGGTAGCCATGCCTGCCCTGCTGTCAAAGTTCATTTGCGTCTTAGCATTGCCCGTGCGCCTGAACATCGAAGCATTGACATTTCACTAGAGACTACTGGGATCGCTGGTGATGGTAGGAAGCACCACTGGCCTGTACAGCTGTTCACACTAAGATAG | 1866 | 42.34 | MDQFSKDLDKEICNAEKFEREEEDDDGDEEQEEGQDDWDDWNADEEEGEEAFDSNFLCLFCNSKYNHCDTLFNHCNSVHYFDFHSIRRALGLDFYGSFKIINYIRSQVADNRCWSCGLSCKSNQDLQNHLHKILNLDDIKALWDDDKYLKPFRQDDPLLYSFTEDEEDDDEMTRENLPFHPNQNKENGVEDCSSTSHDYLNAPSNLEGEIENTVKTTETLGLKDEMQEDIQFKLARRNFDRKDIKNANESYFGSYSSFGIHKEMLSDKVRMEAYMEAILQNPSLFHNAAVMDVGCGTGILSLFAAKAGASRVIAVEASEKMAAVATQIAKDNGLWWNRKQTRDCDMSSGTIEVVHGMVEELDKNIEIAPHSVDVLLSEWMGYCLLYESMLSSVLFARDRWLKPGGAILPDTATILVAGFGVGGTSLPFWENVYGFRMSCVGKELVKDAANTPIVDIVDANDLVTSPAILHTFDLATMHPDEVDFTASTELEPNSHDPSNSNSVEVEASRCHGVVLWFETGFTSRFCKESPAVLSTSPYTPKTHWSQTILTFREPVAITSRKSRTNISAPVGSHACPAVKVHLRLSIARAPEHRSIDISLETTGIAGDGRKHHWPVQLFTLR | 621 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 39366794 | 39370768 | + | CrPI670011_05g028640.1 | Cre05g2864 | 499377 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre05g2864 | 621 | MobiDBLite | consensus disorder prediction | 18 | 41 | - | - | |
| Cre05g2864 | 621 | Gene3D | Vaccinia Virus protein VP39 | 239 | 409 | IPR029063 | - | |
| Cre05g2864 | 621 | SUPERFAMILY | beta-beta-alpha zinc fingers | 34 | 173 | IPR036236 | - | |
| Cre05g2864 | 621 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 58 | 79 | IPR013087 | - | |
| Cre05g2864 | 621 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 254 | 559 | IPR029063 | - | |
| Cre05g2864 | 621 | Pfam | Methyltransferase domain | 290 | 405 | IPR041698 | - | |
| Cre05g2864 | 621 | FunFam | Protein arginine N-methyltransferase 6 | 244 | 409 | - | - | |
| Cre05g2864 | 621 | CDD | AdoMet_MTases | 290 | 408 | - | - | |
| Cre05g2864 | 621 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Cre05g2864 | 621 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE | 214 | 602 | IPR025799 | GO:0005634(PANTHER)|GO:0016274(InterPro)|GO:0018216(InterPro) | |
| Cre05g2864 | 621 | Pfam | Protein arginine N-methyltransferase 3, C2H2 zinc finger domain | 87 | 151 | IPR049482 | - | |
| Cre05g2864 | 621 | Pfam | Arginine methyltransferase oligomerization subdomain | 411 | 559 | - | - | |
| Cre05g2864 | 621 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Cre05g2864 | 621 | Gene3D | - | 412 | 612 | - | - | |
| Cre05g2864 | 621 | ProSiteProfiles | SAM-dependent methyltransferase PRMT-type domain profile. | 248 | 579 | IPR025799 | GO:0016274(InterPro)|GO:0018216(InterPro) | |
| Cre05g2864 | 621 | Coils | Coil | 1 | 21 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g2864 | Cre-Chr5:39366794 | Cre09g1731 | Cre-Chr9:35592343 | 6.90E-49 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre05g2864 | K11436 | - | csv:101215999 | 1049.27 |