Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g0828 ATGGGCGGCGGAGGTGAAGGAACGACGCTGGAATTCACTCCGACGTGGGTTGTAGCCGCCGTCTGTACCGTCATCGTCGCCATTTCGCTCGCTTTAGAGCGTCTCCTTCACTTCCTCGGCAAATACCTCAAGAAGAAGAATCAGAAGCCGCTCAATGAAGCTCTTCAGAAAGTTAAAGAAGAATTGATGCTTTTGGGGTTTATTTCGCTTCTGCTCACTGTATTTCAAGGCACCATCTCTAAATTGTGTGTTCCTGAGAGTTTGACTGAGCATTTACTTCCGTGTGATCTGAAGGATAAAGCTAAAGCTGAACATGGTTCGCCCTCGGGTGAAACTGGTTCGTCAACGACAACGCATTTTCAAACATTCTTTGTTTCGAGTATTTCTGGTACGGCCAGGCGCCTTCTTTCTGAGGGATCGGCTTCACAGACTGGTTATTGTGCCAAAAAGAATAAGGTGCCATTGCTATCACTTGAAGCATTGCATCATCTACATATTTTTATCTTCATCCTAGCTATCGTCCATGTGACATTTTGCGTTCTCACTGTAGTTTTTGGAGGATTGAAGATTCGTCAGTGGAAGCATTGGGAGGATTCTATTGCAAAAGAGAATTATGATACCGAACAAGTTCTAAAACCAAAAGTCACCCATGTCCATCAACATGCTTTTATCAAGGACCACTTTTTGGGCTTTGGTAAAGATTCAGCTCTTCTTGGTTGGTTGCATTCCTTCCTCAAGCAATTTTATGCTTCTGTAACAAAATCAGATTATGCAACGTTACGGCTTGGTTTCATTATGACGCACTGCAGGGGAAACCCGAAGTTTAATTTTCACAAGTACATGATACGTGCCCTTGAAGATGACTTCAAGCATGTTGTTGGTATCAGTTGGTATCTTTGGATATTCGTGGTTGTCTTCTTGTTCCTTAATGTTAGTGGTTGGCATACATATTTCTGGATAGCATTCATTCCTTTCATTCTTCTGCTCGCTGTGGGAACGAAGCTGGAACATGTGATAACCCAGCTGGCTCATGAGGTTGCAGAGAAGCATGTAGCAATCGAAGGTGATCTAGTAGTCCAACCGTCCGATGATCACTTTTGGTTTCATCGTCCCCGTATTGTTCTCTTCTTGATCCACTTTATACTTTTCCAAAACGCTTTTGAGATTGGATTCTTCTTCTGGATATGGGTTCAATATGGCTTTGACTCGTGCATCATGGGACAAGTCCGCTATATCATTCCAAGGCTCATCATTGGGGTATTTGTTCAGGTTCTTTGCAGCTACAGCACCCTACCGCTCTACGCCATTGTCACTCAGATGGGAAGTTCTTTCAAGAAAGCAATCTTTGATGAACATGTACAAGTAGGCCTAGTTGGTTGGGCTCAGAAGGTGAAGAAAAGAAAAGGACTTAGAGCAGCTGCTGATGGGTCCAGCCAAGGAGGGAAGGAAGGTGGTTCTACTGTGGGGATTCAACTGGGAAATGTTATGCGCAAGGCTTCTGCTCCTAATGAAATTAAGCCTGATGACTCCAAATCAAATGATCTGCCATAG 1551 43.84 MGGGGEGTTLEFTPTWVVAAVCTVIVAISLALERLLHFLGKYLKKKNQKPLNEALQKVKEELMLLGFISLLLTVFQGTISKLCVPESLTEHLLPCDLKDKAKAEHGSPSGETGSSTTTHFQTFFVSSISGTARRLLSEGSASQTGYCAKKNKVPLLSLEALHHLHIFIFILAIVHVTFCVLTVVFGGLKIRQWKHWEDSIAKENYDTEQVLKPKVTHVHQHAFIKDHFLGFGKDSALLGWLHSFLKQFYASVTKSDYATLRLGFIMTHCRGNPKFNFHKYMIRALEDDFKHVVGISWYLWIFVVVFLFLNVSGWHTYFWIAFIPFILLLAVGTKLEHVITQLAHEVAEKHVAIEGDLVVQPSDDHFWFHRPRIVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGQVRYIIPRLIIGVFVQVLCSYSTLPLYAIVTQMGSSFKKAIFDEHVQVGLVGWAQKVKKRKGLRAAADGSSQGGKEGGSTVGIQLGNVMRKASAPNEIKPDDSKSNDLP 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1616964 1622942 + CrPI670011_06g008280.1 Cre06g0828 500290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g0828 516 MobiDBLite consensus disorder prediction 502 516 - -
Cre06g0828 516 MobiDBLite consensus disorder prediction 494 516 - -
Cre06g0828 516 PANTHER MLO-LIKE PROTEIN 1 1 481 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cre06g0828 516 Pfam Mlo family 8 477 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0375 Cre-Chr2:923095 Cre06g0828 Cre-Chr6:1616964 1.90E-87 dispersed
Cre06g0828 Cre-Chr6:1616964 Cre08g0871 Cre-Chr8:21835728 4.80E-96 dispersed
Cre06g0828 Cre-Chr6:1616964 Cre02g2410 Cre-Chr2:37492918 1.60E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g0828 K08472 - csv:101211868 993.416