Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g0836 ATGGCCTACCGACCCAACCATTCCCCCAACGCTTTTTTCAATCATTATTCTCCCCAGGCCTCCGCCATGAAAATAAAGCAGAGAAAAGCTCCACAAATTCCCCTTCTTCCAATCAAAAAACAGAAAAGGATGCTGAACCACCCTGGACAATGGGTGGTGCTGGTGGCGGCAATATGGATTCAGGCATTTGCCGGCACAAATTTTGATTTCCCCTCTTATTCTTCCGATCTGAAGGCGGCTCTGGGGATGTCGCAGGTGGAGCTCAACTATCTGGCGGTGGCTTCCGACCTTGGCAAGGCCTTCGGGTGGTGCTCTGGCGTCGCTCTCTTATATTTTCCTTTGTGGGTGGTGATGTTCATGGCTGCTTCCATGGGGTTTCTTGGCTATGGCCTCCAATGGCTTCTCCTTCAAAGGATTGTCTCTCTGCCTTACTCTATGGTTTATCTTCTCTGCTTGATGGCTGGATGTAGTATTTGCTGGTTCAACACGGTCTGCTATGTCTCATGTATCCAAAATTTTCCAGCCAACCGTGCCCTTGCATTGTCCTTGATTGTCAGCTTCAATGGCGTCAGTGCAGCTCTATACACCCTAATTGCCAATGCAGTAGACCCCAATGATGCCGGTTTGTACCTCTTCCTAAATGCACTGGTTCCTCTCATCATCTCTATCGTTGCCCTCCTCCCAATCCTTCATCAGCCACCAGTTCAACCATCCTCTGCTGATGCCATCCGCCATGACTCTCTCATCTTCATATGCTTATACATCACGGCCGTTATCACAGGGGTGTACTTAATCACCTTCAATTCCAAGCCTTCCTACAAATACAGGTCCCAAATTCTGTTAGCAGGGGCTCTTGCCCTTTTACTAGTTCCTCTTTGTTTGCCAGGAATTCTTAGTACACGCAGGTGGTTGGCTCGGATCATATCCACCAGCTTGAGCCGTCTTATTCACTCTAGATTTAACCTTGTTGATCATGAGCTTCACCAGGAGCTCATTGCTGTTGGAACAGAACGAAATGGTATGAAGGTCATCATCCCTTTTGATTCTAAAGAGAAGGAAAGCACTTCGAGGAAGGTGATGGAGAAAGAGAACTTGGTAATGCTTGAAGAAGAGCATTCGGCTAAGATGCTGTTGCGACGGTTGGACTTTTGGCTCTATTATGTTGCATACTTTTGTGGTGGTACGATTGGGTTGGTTTACAGCAACAATCTTGGACAAATTGCACAGTCGCTTGGATATAGTTCGTCAACAAGTTCACTTGTAACACTCTACTCTTCTTGCTCCTTCTTTGGGCGGTTAATCTCAGCAGCCCCAGATTTCATGCGTGAAAAGGTGCGTTTCGCCAGAACAGGGTGGCTAGCCATCGCACTGGTGCCAACTCCAATCGCCTTCATTTTACTCGCTGCATCAGGCAGCAAAATCGCATTACAAGCTGGCACTGGCTTGATCGGCCTAAGCTCGGGATTCATATTTTCAGCCTCAGTCTCAATCACATCAGAGTTATTCGGACCGAACAGTTCAGGGGTCAACCACAACATCCTCATCACTAACATCCCTCTTGGCTCGTTCCTCTACGGCGTCCTGGCGGCAGTGGCGTACGATTCAAACGCCGAAAGTTCACACCAGACGGCGGCGCTGGGGGACGCGGTAGTGTGCATCGGCCAGAATTGCTATCTGCAGACGTTCGTATGGTGGGCTTGCATCTCCATCTTCGGCCTGGCTTCTAGCTTCTTGCTTTTCCGACGGACGAGACCGGCTTACGACCGCCATTACGAGAGTAACCTAAGCAAGATGCAGCCATTTTAG 1806 48.95 MAYRPNHSPNAFFNHYSPQASAMKIKQRKAPQIPLLPIKKQKRMLNHPGQWVVLVAAIWIQAFAGTNFDFPSYSSDLKAALGMSQVELNYLAVASDLGKAFGWCSGVALLYFPLWVVMFMAASMGFLGYGLQWLLLQRIVSLPYSMVYLLCLMAGCSICWFNTVCYVSCIQNFPANRALALSLIVSFNGVSAALYTLIANAVDPNDAGLYLFLNALVPLIISIVALLPILHQPPVQPSSADAIRHDSLIFICLYITAVITGVYLITFNSKPSYKYRSQILLAGALALLLVPLCLPGILSTRRWLARIISTSLSRLIHSRFNLVDHELHQELIAVGTERNGMKVIIPFDSKEKESTSRKVMEKENLVMLEEEHSAKMLLRRLDFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGYSSSTSSLVTLYSSCSFFGRLISAAPDFMREKVRFARTGWLAIALVPTPIAFILLAASGSKIALQAGTGLIGLSSGFIFSASVSITSELFGPNSSGVNHNILITNIPLGSFLYGVLAAVAYDSNAESSHQTAALGDAVVCIGQNCYLQTFVWWACISIFGLASSFLLFRRTRPAYDRHYESNLSKMQPF 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1680175 1683075 + CrPI670011_06g008360.1 Cre06g0836 500298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g0836 601 Gene3D MFS general substrate transporter like domains 344 574 IPR036259 -
Cre06g0836 601 SUPERFAMILY MFS general substrate transporter 41 586 IPR036259 -
Cre06g0836 601 Gene3D MFS general substrate transporter like domains 14 230 IPR036259 -
Cre06g0836 601 Pfam Nodulin-like 50 295 IPR010658 -
Cre06g0836 601 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 50 589 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0341 Cre-Chr3:1853674 Cre06g0836 Cre-Chr6:1680175 4.40E-73 dispersed
Cre06g0836 Cre-Chr6:1680175 Cre07g1486 Cre-Chr7:30111729 3.90E-174 dispersed
Cre06g0836 Cre-Chr6:1680175 Cre02g1490 Cre-Chr2:27012904 2.40E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g0836 - - - 0.0