Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g0873 ATGATGAGAGAGAGAAGAAGTTGTGTTGTTGTATCCCTTGTGGGTATAGCATTATTGATGAGTTTATCCATTGTGAGAGGTGAAAATACATTACAATCACCAGTTAAGCTGGTATGGCATTACTACAAGCTCAACGCAACTTGCCCTTATGCTGAGGAATTCATAAAGCATCAAGTCAAGTTGTTTTGGGACAAGGATAAGAGCATTGCTGCCAAGTTCCTTCGTTTGCTCTCTGCAGATTGCCTTTCCAAAAACGGTTGTGACGGCTCAATACTTCTTGATGGTCCAAATTCAGAGAAAAATGCACCACAAAACCAAGGCCTTGGAGGGTTTGAAGAGATTGACAAGATCAAAATTGTACTCGAAGAAAGATGTCCGGGTGTTGTTTCTTGTACAGACATTTTGAACCTAGCCACTAGAGATGCTGCCCATTTGGCAGGTGCACCATCTTATCCAGTTTTTACTGGGAGGAGGGATGGTTTTACAAGTAGTATTGATGCAGTGGATTTACCATCTCCCTCCATATCATGGCAAGAAGGACTTAATTATTTTCAATCTAAAGGTCTTGATGTTTTGGACATGACAACACTCCTAGGTGCACACTCAATGGGAAAAACACACTGTCGATACATCATGGATAGGCTATACAATTTCAAAGGCACAAAAAAACCCGATCCATCAATGGACAAATCATTGTTAAAACAGCTTCAAAAGAAATGTCCCAAAAATTCAAAAACAGACCCAACAGTGAATCTAACACCAAAATCTGGAAATGACTATCAATTCACAAGTCTTTACTACTCGAGAATCCTTTCGAAAAAGGCGGTCCTCGGTATCGATCAACAGCTTCTTTTCGGTAACGACACGAATGAAATTGTCCAGGAATTTGCTCCAAAATCTGGATTTGAAGACTTCCGTCGGTCCTTTGCTTTGTCTATGAGTAGGATGGGAAATATCAAGGTTTTGACTGGAAAAGCTGGCGAGATTCGACGACATTGTCGCCGAAGAAACTAG 1014 40.83 MMRERRSCVVVSLVGIALLMSLSIVRGENTLQSPVKLVWHYYKLNATCPYAEEFIKHQVKLFWDKDKSIAAKFLRLLSADCLSKNGCDGSILLDGPNSEKNAPQNQGLGGFEEIDKIKIVLEERCPGVVSCTDILNLATRDAAHLAGAPSYPVFTGRRDGFTSSIDAVDLPSPSISWQEGLNYFQSKGLDVLDMTTLLGAHSMGKTHCRYIMDRLYNFKGTKKPDPSMDKSLLKQLQKKCPKNSKTDPTVNLTPKSGNDYQFTSLYYSRILSKKAVLGIDQQLLFGNDTNEIVQEFAPKSGFEDFRRSFALSMSRMGNIKVLTGKAGEIRRHCRRRN 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2052699 2057111 + CrPI670011_06g008730.1 Cre06g0873 500335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g0873 337 FunFam Peroxidase 171 316 - -
Cre06g0873 337 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Cre06g0873 337 CDD secretory_peroxidase 36 335 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre06g0873 337 Gene3D - 41 337 - -
Cre06g0873 337 Pfam Peroxidase 56 297 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 PANTHER PEROXIDASE 25-RELATED 40 333 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cre06g0873 337 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 Gene3D Peroxidase, domain 2 171 316 - -
Cre06g0873 337 ProSiteProfiles Plant heme peroxidase family profile. 36 337 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre06g0873 337 SUPERFAMILY Heme-dependent peroxidases 43 337 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g0873 Cre-Chr6:2052699 Cre05g2727 Cre-Chr5:38132766 4.40E-50 dispersed
Cre06g0873 Cre-Chr6:2052699 Cre04g1291 Cre-Chr4:31693565 5.20E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g0873 K00430 - csv:101213667 583.178