Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre06g0923 | ATGATGGATGGTTGGCTAACAGCGCTCCTTGCCCTTTCAATTTGTGCAGTCTTACACTTAGTTTTGAGCTTTATTTTGCATCGCAACCAAAATCTCCCACCCGGTCCTCTTGCTTTACCTCTTATAGGCAATCCCATATGGCTTTTCAAGCCTCTTTCCCAACTTGAAACCATTCTTCGCCATTACCATTCCAAATACGGCCCTGTTGTTACCCTTTACTTTGGTAACACTCCTTCCATTTTCATAGCTAGCCACTCTGTTTCTCACCATGCTTTGGTTCAAAACGGCGCCGTCTTCGCCGACCGTTTCCCCGTCATGGAAACTGCCAAAATCATCACTAGTAACCAACATAATATCAGCACCGCCTTCTACGGTCCCACATGGCGTATTCTCCGCCGCAACCTCACCTCCGAGCTCCTCCATCCGTCTCGATTGAAAGCTCACTCGCCTACTCGTAAATGGGTGTCGGATGATCTCGTCCATCGCCTCCATCAGGCCCCTGGTCCTGTAAAGCTCCTTGACCATCTTCGTTATGCCATGTTTTGCTTAGCTACAACTATGTGTTTTGGGGAGAGATTTGATGAGAAATTGATTCGTGAAATACAAGAATCTCAACGTGGGGTGTTGTTGAATATCACCAAGTTCAATGATCTTAATTTTTGGCCTCCTAGATTGGGGAAGTTTTTGTTCAAGAAGCGTTGGGAAGAGATTCGTCAACTACGTAAACGTCAAGATGATTGCTTATTACCTTTGATTAACAAAGCAAGACAAAACAGAACAACAATCAAAGATAAAGAAGCTGCAGGGAAGGCAATCCCTTATGTTGATACTCTGTTTGATTTGGAAATTGCTGACAACAATGACGAGAAGGTAAAGAGGAAATTGGTTGATGATGAGCTCATAACATTATGCTCTGAGTTTCTTGACGCCATTACGGATACAACGACCGTGTCGTTGCAATGGATAATGGCGAATTTAGTAAAGCAAACAGAAATTCAAGAGAAAGTGTACAAGGAGATAAAAGAAGTGATGCAAAATAAGGAGAAGAATGAAGAGATAGAAGAGGAAGATTTGGGGAAGATGACATATTTGAAAGCAGTAATAATGGAAGGACTACGGCGACACCCGCCAGGGCATTTTTTGTTGCCTCATCAAGTGATGGAGGATAGTGTTTTGGAAGGAGGATACAAGGTGCCAAAAGGAACATCAGTGAACTTTATGGTAGCAGACATGGGTTGGGACCCGAAAGTATGGCCGGAACCGACGGCGTTTAAGCCGGAGAGATTCTTGAATGATAGGTCAAAGGGAGGGGTTGAATTGGAAGTTGATATCACAGGAAGTAAGGAAATAAAGATGATGCCATTTGGGGCTGGGAGGAGGATATGCCCAGGATTTGCATTGGGGTTATTGCATTTGGAGTATTACATTGGGAATTTGTTGTGGAACTTCGAGTGGAAGGCTGCTGGGAAAGTTGATTTGACTGAGACCCAAGAAAATGCTGTCACCATGAAATATCCCTTGCTTGCTTACTTGTCTCCAAGGCCTGTTTCTTAG | 1554 | 43.89 | MMDGWLTALLALSICAVLHLVLSFILHRNQNLPPGPLALPLIGNPIWLFKPLSQLETILRHYHSKYGPVVTLYFGNTPSIFIASHSVSHHALVQNGAVFADRFPVMETAKIITSNQHNISTAFYGPTWRILRRNLTSELLHPSRLKAHSPTRKWVSDDLVHRLHQAPGPVKLLDHLRYAMFCLATTMCFGERFDEKLIREIQESQRGVLLNITKFNDLNFWPPRLGKFLFKKRWEEIRQLRKRQDDCLLPLINKARQNRTTIKDKEAAGKAIPYVDTLFDLEIADNNDEKVKRKLVDDELITLCSEFLDAITDTTTVSLQWIMANLVKQTEIQEKVYKEIKEVMQNKEKNEEIEEEDLGKMTYLKAVIMEGLRRHPPGHFLLPHQVMEDSVLEGGYKVPKGTSVNFMVADMGWDPKVWPEPTAFKPERFLNDRSKGGVELEVDITGSKEIKMMPFGAGRRICPGFALGLLHLEYYIGNLLWNFEWKAAGKVDLTETQENAVTMKYPLLAYLSPRPVS | 517 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 2646868 | 2648421 | + | CrPI670011_06g009230.1 | Cre06g0923 | 500385 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre06g0923 | 517 | Gene3D | Cytochrome P450 | 25 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | CDD | CYP77_89 | 65 | 507 | - | - | |
| Cre06g0923 | 517 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 18 | 514 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cre06g0923 | 517 | Coils | Coil | 337 | 357 | - | - | |
| Cre06g0923 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 455 | 464 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre06g0923 | 517 | FunFam | Cytochrome P450 family protein | 26 | 516 | - | - | |
| Cre06g0923 | 517 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | E-class P450 group I signature | 462 | 485 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | E-class P450 group I signature | 452 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | E-class P450 group I signature | 407 | 431 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | P450 superfamily signature | 453 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | PRINTS | P450 superfamily signature | 462 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | SUPERFAMILY | Cytochrome P450 | 31 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0923 | 517 | Pfam | Cytochrome P450 | 33 | 503 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre02g1099 | Cre-Chr2:9530017 | Cre06g0923 | Cre-Chr6:2646868 | 2.60E-118 | dispersed | |
| Cre06g0923 | Cre-Chr6:2646868 | Cre09g2434 | Cre-Chr9:43728025 | 3.40E-142 | dispersed | |
| Cre06g0922 | Cre-Chr6:2641939 | Cre06g0923 | Cre-Chr6:2646868 | 8.90E-42 | tandem | |
| Cre06g0923 | Cre-Chr6:2646868 | Cre06g0924 | Cre-Chr6:2653632 | 8.30E-48 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre06g0923 | K24184 | - | csv:101204774 | 848.58 |