Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre06g0924 | ATGGAGACCACCACCTATTTTCCGTTTTTAGTTACATTCTTGGCTTTGCTTTCCATTTTCTTGTTCCAAAAAACAAAAAACAGAACAAAAAAGAATCTCCCTCCCACTCCTCTGGCTCTCCCAATCCTTGGCCATCTTCATCTCCTCAAACACCCAATCCACAGAACTCTCCACTCTCTCGCCCAAAAATACGGCCCAATCTTCACTCTCCGTCTCGGCGCTCGTCTCGTCGTCGTCGTCTCCTCCACATCCGCCGTCGAAGAATGCTTCACAACAAACGACATCGTTTTCGCAAACCGACCCGAATTCGTCTCCGGCAAGTACCTCAGCTACGGTAACAGCACGCTTGGGGCAGCCCCATATGGCGATCATTGGCGCAATTTACGGCGGTTGAGCGCGACGGAAGTCTTGTCGTCGATCCGGTTGAACGTGTCAGCAGGAATCCGAAAGGAAGAGATCGAGATTTTGCTTAGGAAATTGTACAAAGTTTCGAGAACAGAGTTTGGGAAAGTGAAGTTGAAATCATTGTTCTCGGAGTTGACATTCAATATGATAATGAGAATGGTGGCTGGAAAAAGGTATTATGGGGAAGAAGTGAGTGAATTGGAAGAGGCGAAAAAGTTCAGAGAAATAATGGAGAAGTCGTTCCAATTGGGATCATATCCGGGGGATTTCTTGCCATTCTTGAAATGGGTTGATTGGCAATACACAAAAAGAGTGGAAAGTCTTGGAAGAGATACGGATTCGTTCTTGCAAAATTTGGTGGATGAACATCGAAGAAATGAAGAGGAAGGGAAAAAGGGGAATACAATGATTAGCCATCTCCTCTGTTTGCAGAAAACTCAGCCTGACTATTACACTGATGAAATTATTAAAGGCCTCATCGTTACAATTTTGTCAGCAGCAACGGAGACATCATCAGTGACAATAGAATGGGCAATGTCAAATCTCCTAAACCATCCAGAATCATTAAACAAAGTGAAGAATGAATTGGACACAAAAATAGGGGAAGACCGGATTCTAGATGAAGAAGATGTCTCAAATTTACCATATCTTCAGAATGTAATTTCAGAGACACTACGCCTTTATCCAGCAGCTCCACTCTTAGCTCCACATTTATCATCACAAAATTGTTCTTTAGGAGGATACAACATTCCAGCTGACACAATCTTAATGGTCAATGCATGGGCTGTTCAAAGAGATCCCAAAGTTTGGGAAGATTCAACAAGCTTTAAACCTGAGAGGTTTGAAAGTGAAGGAGGAGCTACCAATAATGGTTATAAATTCTTGCCATTTGGATTGGGAAGAAGGGCTTGTCCTGGGATGGGAATGGCTAACCGTGTGGTGGGCTTGACTTTGGGTTCGTTGATTCAGGGGTTTGAGTGGAAGAGAGTGAGTGAAAAGGAGATTGATATGACTGAAGGTCAAGGGATTTCTATGCCTAAAGTTGAGCCATTGGAGGCATTGTGTAGAGCTCGTCCCATCATCAACAAGCTTGCATTAGATTAA | 1509 | 43.47 | METTTYFPFLVTFLALLSIFLFQKTKNRTKKNLPPTPLALPILGHLHLLKHPIHRTLHSLAQKYGPIFTLRLGARLVVVVSSTSAVEECFTTNDIVFANRPEFVSGKYLSYGNSTLGAAPYGDHWRNLRRLSATEVLSSIRLNVSAGIRKEEIEILLRKLYKVSRTEFGKVKLKSLFSELTFNMIMRMVAGKRYYGEEVSELEEAKKFREIMEKSFQLGSYPGDFLPFLKWVDWQYTKRVESLGRDTDSFLQNLVDEHRRNEEEGKKGNTMISHLLCLQKTQPDYYTDEIIKGLIVTILSAATETSSVTIEWAMSNLLNHPESLNKVKNELDTKIGEDRILDEEDVSNLPYLQNVISETLRLYPAAPLLAPHLSSQNCSLGGYNIPADTILMVNAWAVQRDPKVWEDSTSFKPERFESEGGATNNGYKFLPFGLGRRACPGMGMANRVVGLTLGSLIQGFEWKRVSEKEIDMTEGQGISMPKVEPLEALCRARPIINKLALD | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 2653632 | 2655892 | - | CrPI670011_06g009240.1 | Cre06g0924 | 500386 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre06g0924 | 502 | CDD | CYP81 | 65 | 486 | - | - | |
| Cre06g0924 | 502 | Pfam | Cytochrome P450 | 34 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | FunFam | Cytochrome P450 family protein | 24 | 496 | - | - | |
| Cre06g0924 | 502 | PANTHER | CYTOCHROME P450 82C3-RELATED | 12 | 493 | IPR050651 | - | |
| Cre06g0924 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 432 | 441 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre06g0924 | 502 | SUPERFAMILY | Cytochrome P450 | 34 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | P450 superfamily signature | 430 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | Gene3D | Cytochrome P450 | 19 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | E-class P450 group I signature | 429 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g0924 | 502 | PRINTS | E-class P450 group I signature | 439 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre04g1338 | Cre-Chr4:32214180 | Cre06g0924 | Cre-Chr6:2653632 | 9.70E-163 | dispersed | |
| Cre04g1340 | Cre-Chr4:32227527 | Cre06g0924 | Cre-Chr6:2653632 | 1.70E-159 | dispersed | |
| Cre05g2221 | Cre-Chr5:33876875 | Cre06g0924 | Cre-Chr6:2653632 | 8.50E-149 | dispersed | |
| Cre06g0922 | Cre-Chr6:2641939 | Cre06g0924 | Cre-Chr6:2653632 | 1.70E-167 | dispersed | |
| Cre06g0924 | Cre-Chr6:2653632 | Cre08g1574 | Cre-Chr8:28319998 | 2.30E-127 | dispersed | |
| Cre06g0923 | Cre-Chr6:2646868 | Cre06g0924 | Cre-Chr6:2653632 | 8.30E-48 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre06g0924 | K13260 | - | cmo:103498908 | 876.7 |