Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g0976 ATGGAACCCTATCGTCCTCAGGGAAAATCTTCCATCACAACCAGTTCCACTACCAATCTTCCTCTCTACCGCTCTGCTCCTCCTCTTGAAGTCAAGCTTGAAGATTTCGAGCTTTATGCTATAGATCGTCTTCGAGTTCTTAAAGGGATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGGGAAACTGGTTAGAGAATTGTGGAATACCAATATGAAACATCCACAGGCATCTGAGGATGTGAACAAGGATATAATCTCTCACTTTGTTTTGCGCCTTGTATACTGCAGAACGGAGGAATTGAGAAAATGGTTTCTTTCTATGGAAACTATGCTATTCCGACACCGTTTTCTTTATGCAAGTTCTGAATCTCAGAAGCAGGTCTTTGCGGAGCTTGGTCTCCCATACAAAGCAATCAGTTATACAGAATTTGAGGCTGTAAAGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGACTGTACCAAGTGGTGATGCTATATACTATAAGGTACCATGGGAAGAAGTTCCAGAGCTAGTGGCTGGTCGAAGAATATTTCTCCATAAAGGATATGCATATATTGCTATGTATCAGGTGGTTTCCCTTGCTGCAACACAATTCCGCAGTTACCTATCAAAGGCCCTAAGTCTGACAAACAGGAAATGGACATCTACAATAAGAGAACAAGAGAAAGATAGGTTGACCCCAATAGTAGAAGCCCTTTGCACGAGCTACCTGGGTCCTGACTACTCACAGCCAAGAGAGTATGGTGATATATCAATAAAAGACCTTGACCAAATAGCTAAAAGTTCATTTCCTCTTTGCATGCGACACCTATTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGGATGCAATTAGGTCTCTTTCTCAAGGGTGTTGGTTTGAAGCTTGATGATGCCCTGGCTTTCTGGAAAGCTGAGTTCTCCCAGAGAGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGGCATAATTATGGAAAAGAAGGCAAGAGAGTGGATTATTCGCCTTATTCCTGTCAAAAAATAATCTCATCATCACCTAGTGTTGGAGATCATCATGGATGTCCCTACAGACATTTCAGTGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAATAACAGGACAATGGACGATATAATGGACAAAGTGCGAAATAGACATTATCAGTTGGCATGCACCTTGACATTTGAATCGATCCATGGCTCGTCGTGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAGAAGGTCCTTCAATCTAAGAACAATTCAACAGCCTAG 1359 41.5 MEPYRPQGKSSITTSSTTNLPLYRSAPPLEVKLEDFELYAIDRLRVLKGISDGLSRGKKSEEMGKLVRELWNTNMKHPQASEDVNKDIISHFVLRLVYCRTEELRKWFLSMETMLFRHRFLYASSESQKQVFAELGLPYKAISYTEFEAVKDKLVQVARLIGQTVPSGDAIYYKVPWEEVPELVAGRRIFLHKGYAYIAMYQVVSLAATQFRSYLSKALSLTNRKWTSTIREQEKDRLTPIVEALCTSYLGPDYSQPREYGDISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKIISSSPSVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMDDIMDKVRNRHYQLACTLTFESIHGSSCDAGINHPNQYFIDSQKVLQSKNNSTA 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3228899 3237415 + CrPI670011_06g009760.1 Cre06g0976 500438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g0976 452 CDD PriL_PriS_Eukaryotic 22 440 IPR016558 -
Cre06g0976 452 Gene3D - 4 245 - -
Cre06g0976 452 PANTHER DNA PRIMASE LARGE SUBUNIT 15 449 IPR007238 GO:0005658(PANTHER)|GO:0006269(PANTHER)|GO:0006269(InterPro)|GO:0006270(PANTHER)
Cre06g0976 452 Pfam Eukaryotic and archaeal DNA primase, large subunit 172 437 IPR007238 GO:0006269(InterPro)
Cre06g0976 452 FunFam DNA primase large subunit 5 245 - -
Cre06g0976 452 PIRSF DNA_primase_large 3 452 IPR016558 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g0976 K02685 - csv:101217274 842.032