Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre06g1047 | ATGTCGTTGAGTAGCGAAATCGAAAGCCTTTGGGTTCTGGCTTTGGCTTCCAAATGCTCAGCCCTCACTAAACAAAACATCTTTTTCTCTCTACTTCTTCTTCTCCTAATTTGGTTTTTCCTTTCCATTTTCTATTGGGCCCATCCTGGCGGCCCAGCTTGGGGCCGCCGCCGCAATTCCTCCTCCTCCTCCGCCACCATCCCTGGCCCAAGAGGCCTCCCCCTCATCGGCAGTATGAGCTTGATGACGGGTCTGGCCCACCAAAAGATCGCCGCCATGGCCAAATCTCTAGGAGCTACTCGTCTCATGGCTTTCTCACTCGCCAACACTCGCGTGATTGTCACATGCCACCCAGACGTAGCTAAAGACATCCTAAACAGTTCCGTCTTCGCTGACCGTCCGATCAAAGAATCAGCTTACTCTTTGATGTTCAATCGTGCCATTGGATTTGCTCCTTACGGACTTTACTGGCGAACCCTCCGACGAATCGCTTCACACCATCTCTTCTGCCCTAAACAAATCAAATCCTCTGAATCACAACGCCGCCAAATCGCTTCCCAAATGGTCAAAATCTTGTCTTCCACTGCCGCCACCTCATCCTCTCTCCACATTCGTCAAACTCTTAAAACCGCCTCTTTGAATAGCATGATGGGTTCGGTTTTCGGCCGGTTTTACAATCTCTCCGACTCTAATCCTGAAGTCCAACTCCTCCAAAGCCTTGTGGATGAAGGGTATGATTTACTAGGCCTTCTTAACTGGTCCGACCATCTTCCCTTTTTGGCTGATTTCGACCCACAAAAAATCCGGTTCAGATGCTCCCGGTTGGTTCCACAGGTGAACCGCTTCGTCACCCGGATCATCAACCAACATCGGGAAAATTCATCCCAACAAACCATGGATTTCGTCCATGTTCTTCTCTCTCTTCAACAAAACGACAACCTCTCTGACTCCGATATCATCTCCGTTCTTTGGGAAATGATATTTAGAGGAACAGACACGGTAGCGGTTTTAATCGAGTGGATTCTAGCGAGGATGGTGGTTCACAAGGAGGAGCAACAAAAAATACAAGAGGAATTAGATAAGGTGGTTGGGAGATCACGTGCCGTCGTGGAATCCGACATTCCGTCGTTGGTTTATTTAACGGCGGTGGTTAAGGAAGTTCTAAGGTTGCATCCACCCGGCCCACTTCTATCTTGGGCTCGTCTTGCTATTACCGATACCATCGTCGATGGTCATCACGTGCCTTGTGGGACCACTGCCATGGTTAACATGTGGTCGATAGCGCGGGACCCACAGATCTGGTCGGACCCACTTGAATTTATTCCTGAGAGGTTTCTCTCTGGTGGTGCTGACTTGGAGTTTTCGATTATGGGTTCGGATCTACGACTAGCTCCATTTGGGTCGGGTCGGAGGACTTGTCCTGGGAAGGCACTTGCTTGGACAACTGTCACGTTTTGGGTGGCTACACTATTACATGAATTTAAATGGTTGCCTTCTCCTGATCAAAACGACGCCGTCGACTTCTCTGAGGTTCTTAAGCTCTCTTGTGAGATGGCTAATCCACTCACGGTTAAACTATGTCCAAGGCGCACTTAA | 1596 | 49.19 | MSLSSEIESLWVLALASKCSALTKQNIFFSLLLLLLIWFFLSIFYWAHPGGPAWGRRRNSSSSSATIPGPRGLPLIGSMSLMTGLAHQKIAAMAKSLGATRLMAFSLANTRVIVTCHPDVAKDILNSSVFADRPIKESAYSLMFNRAIGFAPYGLYWRTLRRIASHHLFCPKQIKSSESQRRQIASQMVKILSSTAATSSSLHIRQTLKTASLNSMMGSVFGRFYNLSDSNPEVQLLQSLVDEGYDLLGLLNWSDHLPFLADFDPQKIRFRCSRLVPQVNRFVTRIINQHRENSSQQTMDFVHVLLSLQQNDNLSDSDIISVLWEMIFRGTDTVAVLIEWILARMVVHKEEQQKIQEELDKVVGRSRAVVESDIPSLVYLTAVVKEVLRLHPPGPLLSWARLAITDTIVDGHHVPCGTTAMVNMWSIARDPQIWSDPLEFIPERFLSGGADLEFSIMGSDLRLAPFGSGRRTCPGKALAWTTVTFWVATLLHEFKWLPSPDQNDAVDFSEVLKLSCEMANPLTVKLCPRRT | 531 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 4258136 | 4259815 | + | CrPI670011_06g010470.1 | Cre06g1047 | 500509 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre06g1047 | 531 | Gene3D | Cytochrome P450 | 54 | 526 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | CDD | CYP78 | 98 | 522 | - | - | |
| Cre06g1047 | 531 | PRINTS | P450 superfamily signature | 473 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | PRINTS | P450 superfamily signature | 382 | 393 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | PRINTS | P450 superfamily signature | 464 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | PRINTS | E-class P450 group I signature | 463 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | PRINTS | E-class P450 group I signature | 211 | 229 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | PRINTS | E-class P450 group I signature | 423 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | PRINTS | E-class P450 group I signature | 473 | 496 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | PRINTS | E-class P450 group I signature | 381 | 399 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 466 | 475 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre06g1047 | 531 | PANTHER | CYTOCHROME P450 78A7-RELATED | 5 | 525 | IPR051996 | - | |
| Cre06g1047 | 531 | FunFam | Cytochrome P450 78A5 | 59 | 529 | - | - | |
| Cre06g1047 | 531 | Pfam | Cytochrome P450 | 68 | 504 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1047 | 531 | SUPERFAMILY | Cytochrome P450 | 67 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre06g1047 | Cre-Chr6:4258136 | Cre11g1797 | Cre-Chr11:29547594 | 2.00E-129 | dispersed | |
| Cre06g1047 | Cre-Chr6:4258136 | Cre08g0987 | Cre-Chr8:22976887 | 5.40E-135 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre06g1047 | K20619 | - | csv:101216159 | 915.605 |