Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre06g1115 | ATGGCTTCTTTTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCTTTTCCTCTTCGTTTCTCTGCCATCTCTCTCCTTCTCCATCTCGAAAGATGAAGCTTCGTATCTCACTCATCGTCAACTTTTGGCTCTAAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAGAAGGCTTATGTAGCCCTTCAAGCTTGGAAATTGGCCATTTATTCTGACCCTCTAAACATGACAGCCAATTGGGTTGGCGCTGATGTCTGTTCTTACACCGGCATCTACTGTACTACGGCGCTTGACGACTCAGACATGGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCAGAAATTGGCCTCATCACCGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTCTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTCGATGTCAGCAACAACCGCTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCCACCGCTAAGTTCCTCGATCTCAGGTATAATGACTTCGAAGGAGAAATTCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGACACCATCGGAAACTCAACCGTCTCCGTTGTCTCCTTTGCCAACAATGAGTTCTATGGCTGCATTCCCAGCACCATTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATCGGCAACAAGCTTGGCGGCTGTTTCCCACCCGAGATCGGAAACCTCGTCAATCTTACGGTCTTTGATGCGAGCGCCAATGGCTTCGTGGGCCAGCTGCCCGAAACCTTATCGAGCCTCCAAAATTTGGAGATTATGGACATTAGCAACAATGAATTGAGGGGCTTTGTTCCTGGAGGCTTTTGCAAGTTGCCCAAATTAGCTAACTTCACTTTCTCCTTTAATTATTTTGATGGCAAAGATGCAGCGTGTGTTGGAACTAAAGGATCAGAGAAACTCTTTGATGATGCTCAAAATTGTTTGCCCAATCAACCGGAGCAGAAAGATGCAAACAAATGTAGCGTTGTCCTAAAGAAATCAGTGGACTGTGGAAACTGTGGTGGTGGTGGTTCGGGTTCTCCCGAAGTGCCAATGACTCCTGAGGATCCATTTGATCAATCTCCATCGCCGAGATATAGGTCTCCACCACCTCCAGTGACCTCTCCACCACAATCGATCGACACCTCGGTCCCAGAAGTGGAGACTCCTCCTGCCCCATCATTGTCACCAACCTCTGCTCCATTCTCACCACCTAAACTTGAAACCCCCAGTCCATCCCCAGCTGACTCTCTCGAACCACCAGTTCACTCACCACCACCCCTAGTCCATTCCCCACCACCACCGGTCCATTCTCCTCCTCTACCGGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCACCAGTCAACTCCCCACCACCCCCTGTTCACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCATTCCCCACCTCCTCCTGTTCACTCTCCACCACCACCGGTCCACTCCCCACCTCCACCAGTCCACTCCCCACCACCACCGGTCCACTCCCCACCTCCACCGGTCTACTCACCACCACCCCCCGTCCACTCTCCACCCCCACCAGTTCATTCTCCACCTCCTCCTGTTCACTCTCCACCACCACCGATCCACTCCCCACCTCCACCGGTCCACTCACCACCACCCCCCGTCCAGTCTCCACCCCCACCAGTTCATTCTCCACCTCCTCCTGTTCACTCTCCACCACCCCCGGTCCACTCCCCACCACCCCCAGTCCACTCTCCACCACCCCCAGTCCACTCTCCACCCCCACCAGTTTACTCCCCACCTCCACCAGTCCACTCTCCACCACCAGTACACTCCCCACCCCCACCGGTTCATTCTCCACCGCCACCGGTTCATTCTCCACCGCCACCATTCTACTACCCACCGCCACCTGTCCATTCTCCACCGCCACCTGTTTACTCCCCACCGCCACCAGTCCAATCTCCACCACCTCCAACTGCATCTCCTCCTCCTCCTCCTCCCGATTCTTCTCCACCGCCAACATTCGAGGATGTCATCCTCCCACCAAATATCGGCTTCCAATACACATCACCACCTCCACCACAGTTTCCTGGCTATTAA | 2262 | 52.43 | MASFHRKQANHACFLLLFLFVSLPSLSFSISKDEASYLTHRQLLALKEHDQLPDDYKYQLDIPDTFPNERLKKAYVALQAWKLAIYSDPLNMTANWVGADVCSYTGIYCTTALDDSDMEVVAGIDLNHGDIAGYLPPEIGLITDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPHVVLEWPTAKFLDLRYNDFEGEIPSTLFTKEFDAIFLNNNRFTSLIPDTIGNSTVSVVSFANNEFYGCIPSTIGQMSNLNQILFIGNKLGGCFPPEIGNLVNLTVFDASANGFVGQLPETLSSLQNLEIMDISNNELRGFVPGGFCKLPKLANFTFSFNYFDGKDAACVGTKGSEKLFDDAQNCLPNQPEQKDANKCSVVLKKSVDCGNCGGGGSGSPEVPMTPEDPFDQSPSPRYRSPPPPVTSPPQSIDTSVPEVETPPAPSLSPTSAPFSPPKLETPSPSPADSLEPPVHSPPPLVHSPPPPVHSPPLPVHSPPPPVHSPPPPVNSPPPPVHSPPPPVSSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPVHSPPPPVQSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPVHSPPPPVHSPPPPVHSPPPPFYYPPPPVHSPPPPVYSPPPPVQSPPPPTASPPPPPPDSSPPPTFEDVILPPNIGFQYTSPPPPQFPGY | 753 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5052916 | 5055177 | - | CrPI670011_06g011150.1 | Cre06g1115 | 500577 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre06g1115 | 753 | FunFam | Leucine-rich repeat extensin-like protein 1 | 75 | 236 | - | - | |
Cre06g1115 | 753 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 13 | 750 | IPR051582 | - | |
Cre06g1115 | 753 | Pfam | Leucine rich repeat N-terminal domain | 77 | 110 | IPR013210 | - | |
Cre06g1115 | 753 | Pfam | Leucine Rich Repeat | 310 | 332 | IPR001611 | GO:0005515(InterPro) | |
Cre06g1115 | 753 | MobiDBLite | consensus disorder prediction | 397 | 753 | - | - | |
Cre06g1115 | 753 | Gene3D | Ribonuclease Inhibitor | 237 | 353 | IPR032675 | - | |
Cre06g1115 | 753 | MobiDBLite | consensus disorder prediction | 444 | 732 | - | - | |
Cre06g1115 | 753 | MobiDBLite | consensus disorder prediction | 409 | 432 | - | - | |
Cre06g1115 | 753 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 237 | 327 | - | - | |
Cre06g1115 | 753 | Gene3D | Ribonuclease Inhibitor | 72 | 236 | IPR032675 | - | |
Cre06g1115 | 753 | PRINTS | Proline rich extensin signature | 471 | 488 | - | - | |
Cre06g1115 | 753 | PRINTS | Proline rich extensin signature | 489 | 514 | - | - | |
Cre06g1115 | 753 | PRINTS | Proline rich extensin signature | 453 | 469 | - | - | |
Cre06g1115 | 753 | PRINTS | Proline rich extensin signature | 414 | 426 | - | - | |
Cre06g1115 | 753 | PRINTS | Proline rich extensin signature | 426 | 447 | - | - | |
Cre06g1115 | 753 | SUPERFAMILY | L domain-like | 83 | 348 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g1115 | Cre-Chr6:5052916 | Cre06g1119 | Cre-Chr6:5071901 | 7.10E-08 | dispersed | |
Cre06g1115 | Cre-Chr6:5052916 | Cre06g1116 | Cre-Chr6:5060541 | 7.10E-08 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre06g1115 | - | - | - | 0.0 |