Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre06g1116 | ATGGCTTCTTTTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCTCTTCCTTTTCTTTTCACTGCCATCTCTCTCCGTCTCCATCTCGGAAGCGGAAGCTTCGTATCTCACTCGTCGTCAACTTTTGGCTCTAAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAGAAGGCTTATGTAGCCCTTCAAGCTTGGAAATTGGCCATTTATTCTGACCCTCTAAACATGACAGCCAATTGGGTTGGCGCTGATGTCTGTTCTTACACCGGCATCTACTGTACTACGGCGCTTGACGACTCAGACATGGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCAGAAATTGGCCTCATCACCGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTCTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTCGATGTCAGCAACAACCGCTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCCACCGCTAAGTTCCTCGATCTCAGGTATAATGACTTCGAAGGAGAAATTCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGACACCATCGGAAACTCAACCGTCTCCGTTGTCTCCTTTGCCAACAATGAGTTCCATGGCTGCATTCCCAGCACCATTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATCGGCAACAAGCTTGGCGGCTGTTTCCCACCCGAGATCGGAAACCTCGTCAATCTTACGGTCTTTGATGCGAGCGCCAATGGCTTCGTGGGCCAGCTGCCCGAAACCTTATCGGGCCTCCAAAATTTGGAGATTATGGACGTTAGCAACAATGAATTGAGGGGCTTTGTTCCTGGAGGCTTTTGCAAGTTGCCCAAATTAGCTAACTTCACTTTCTCCTTTAATTATTTTGATGGCAAAGATGCAGCGTGTGTTGGAACTAAAGGATCAGAGAAACTCTTTGATGATGCTCAAAATTGTTTGGCCAATCGACCGGAGCAGAAAGATGCAAACAAATGTAGCGTTATCCTAAAGAAATCAGTGGACTGTGGAAACTGTGGTGGTGGTGGTTCGGGTTCTCCCGAAGTGCCAATGACTCCTGAGGATCCATTTGATCAATCTCCATCGCCGAGATATAGGTCTCCACCACCTCCAGTGACCTCTCCACCTGAATCGATCGACACCTCGGTCCCAGAAGTGGGGACTCCTCCTTCTCCAAGTGAGACTTCTATTACATCATCACCACCGTCTCCAATTGAGTATTCACCACCAACCTCTGCACCACAATTGTCACCAACCTCTGCTCCATCATTATCACCAACCTCCGCTTCGATCTCACCACCTACCCTAGAAACCCCCAGTCCATCCCCAGCTGAATCTCCCGAACCACCAATTCATTCACCACCACCCCCAGTCCATTCTCCGCCACCACCGGTCCATTCTCCTCCACCACCGGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCACCAGTCCATTCTCCTCCACCACCGGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCACCGGTCCATTCTCCACCACCTCCTGTCCACTCTCCTCCACCACCAGTCCACTCCCCACCACCTCCTATTTACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCATTCCCCACCTCCTCCCGTCCACTCACCACCACCCCCTGTCCACTCTCCACCACCCCCCGTCCACTCACCACCACCACCCGTCCACTCCCCACCACCACCGGTCCACTCACCACCACCCCCCGTCCACTCTCCCCCACCCCCCGTCCACTCACCACCACCACCCGTCCACTCTCCACCCCCACCAGTTTACTCCCCACCCCCACCTGTTCCTTCTCCACCCCCACCGGTTCACTCCCCACCCCCACCAGTCCATTCTCCACCACCGCCTGTTTACTCCCCACCGCCACCAGTCCAATCTCCACCACCTCCGACTTCATCTCCTCCTCCTCCTCCTCCTCCCGATTCTTCTCCACCGCCATCATTCGAGGACGTCATCCTCCCGCCAAATATCGGCTTCCAATACGCATCACCACCTCCACCACAGTTTCCTGGCTATTGA | 2232 | 52.33 | MASFHRKQANHACFLLLFLFFSLPSLSVSISEAEASYLTRRQLLALKEHDQLPDDYKYQLDIPDTFPNERLKKAYVALQAWKLAIYSDPLNMTANWVGADVCSYTGIYCTTALDDSDMEVVAGIDLNHGDIAGYLPPEIGLITDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPHVVLEWPTAKFLDLRYNDFEGEIPSTLFTKEFDAIFLNNNRFTSLIPDTIGNSTVSVVSFANNEFHGCIPSTIGQMSNLNQILFIGNKLGGCFPPEIGNLVNLTVFDASANGFVGQLPETLSGLQNLEIMDVSNNELRGFVPGGFCKLPKLANFTFSFNYFDGKDAACVGTKGSEKLFDDAQNCLANRPEQKDANKCSVILKKSVDCGNCGGGGSGSPEVPMTPEDPFDQSPSPRYRSPPPPVTSPPESIDTSVPEVGTPPSPSETSITSSPPSPIEYSPPTSAPQLSPTSAPSLSPTSASISPPTLETPSPSPAESPEPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPIYSPPPPVSSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVPSPPPPVHSPPPPVHSPPPPVYSPPPPVQSPPPPTSSPPPPPPPDSSPPPSFEDVILPPNIGFQYASPPPPQFPGY | 743 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5060541 | 5062772 | + | CrPI670011_06g011160.1 | Cre06g1116 | 500578 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre06g1116 | 743 | MobiDBLite | consensus disorder prediction | 397 | 743 | - | - | |
Cre06g1116 | 743 | FunFam | Leucine-rich repeat extensin-like protein 1 | 75 | 236 | - | - | |
Cre06g1116 | 743 | MobiDBLite | consensus disorder prediction | 491 | 722 | - | - | |
Cre06g1116 | 743 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 237 | 328 | - | - | |
Cre06g1116 | 743 | MobiDBLite | consensus disorder prediction | 433 | 457 | - | - | |
Cre06g1116 | 743 | Gene3D | Ribonuclease Inhibitor | 237 | 352 | IPR032675 | - | |
Cre06g1116 | 743 | MobiDBLite | consensus disorder prediction | 467 | 490 | - | - | |
Cre06g1116 | 743 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 13 | 740 | IPR051582 | - | |
Cre06g1116 | 743 | Pfam | Leucine Rich Repeat | 310 | 332 | IPR001611 | GO:0005515(InterPro) | |
Cre06g1116 | 743 | MobiDBLite | consensus disorder prediction | 409 | 432 | - | - | |
Cre06g1116 | 743 | Pfam | Leucine rich repeat N-terminal domain | 77 | 110 | IPR013210 | - | |
Cre06g1116 | 743 | SUPERFAMILY | L domain-like | 83 | 348 | - | - | |
Cre06g1116 | 743 | Gene3D | Ribonuclease Inhibitor | 72 | 236 | IPR032675 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g1116 | Cre-Chr6:5060541 | Cre06g1119 | Cre-Chr6:5071901 | 8.30E-09 | dispersed | |
Cre06g1115 | Cre-Chr6:5052916 | Cre06g1116 | Cre-Chr6:5060541 | 7.10E-08 | tandem | |
Cre06g1116 | Cre-Chr6:5060541 | Cre06g1117 | Cre-Chr6:5064457 | 2.70E-31 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre06g1116 | - | - | - | 0.0 |