Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g1130 ATGCTTCCCCTCTTTGTTTATGGTGGCACGTCGGCAGGAAAAACCAGTGTCATTCTACAAATATTTCGTCATCTCAACCGTCCTTTTGTCTACTCAAGCTGTCGTACTTGTTATAGTTTGCGAACTCTGTTTGATTGTATCTTGAATCAGTTATTACTTCATCAGAAAGATGCAGATAATGGATATTTGAGTGCAAAACGCTGTGAAAAACCATCAGACTTTGTTAACTTTCTTCGTGAAGCCTTAGTTAAAGTTGTAAAAACTCTCCAGGGGAACCCAGGAAAGTTAGGCACCAAGAAGTTGACAGGACAAGAGCATGGGCATATGATCTACCTGATTTTTGACAACTTGGAACTTGTTAGAGACTGGGACAAGAGTTCAAGCATATTGCCTTTTCTATTTAATCTCCATGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTCATCAGTAATACTTCTCCAGACGCATACTATTCAAATATGGGTTACTTGGAGCCCATCCCTGTTTATTTCTCTGAGTACACAGAAGATGATCTTCGTAAAATTTTTATGAGGAATCAAACCAATCAAGAGATGTATTCTTCCTTTCTGAGTGTTGTATTGGGGCCATTCTATAGAATTACTAGACAAGTGAATGAGCTATCCTTAACGTTTTCATCATTGTACAAAACATACTGTGAAGCTTCAGATGATCTGAACAATGTTCCCAACGAGTCCAGCAAGAGGACACGTTTCAGTCATTTTCAGCCACATATTGCCCCTGCTTTGAATCAGATATTTAAAATTTCATCTCCACTTTCCGAGGTTAATAATTTGAAGGAAGCAAAGAGAAAAGGTGGTAGTATGAAGTTTAGCGGGTGCGACTCTTCTGAGCACTTGGATTTTCACATGTCTACTTCAGCAAAATATCTTCTTCTTTCAGCCTTCCTTGCTTCAAGAAACCCAGCTACACTTGATGCATCACTGTTTGATTCAACTGGGGGCACTAGTAGTCGAAAAAAGAGGAAGAGGCCATCTGAAAAATCAATTGAGCAGAAGGAAATTTCAGAACAGGAGTTGCTTATGAAAGGACCTGGAACTTTTCCATTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTGGCAGAAATCTCCCTTGAAGATGAGCAAGGAAATGTTTTAATGGAAAGTCAAAATGAGGATAGTGAACTCATGTCTGATGTTCTCCTGCAACTTTCCAGCCTCTGCAATGCAAACTTTGTGGTTAAAGGAGGAAGTTGCCCACTAGAAGGTTCAACTCGATATCGCTCTACAGTGTCTGAAGATATGGCTTTGAAGGTGGCAAGGAGTATTAAGTTCCCCCTGTCCAAGTGCCAAGAGCATGTAGCATCAACGACTTATTTGCTGGACTCGATAGCACAGCAGTGGCTCAATGATGAGCTTGAGAGAAGAAATGGACTGGATCTAATTCACGAAGAAGAAAAATACAGAAAATTTTTGATGATGGTTAGTTACCAGCTATTGCTGTATGGCTTCAAAAACAGCAGAGATAAGAAAAGGAAAACTGTGGATTATTTTAGCAATGTCTTAGTTGTTCAAAAATGTTGCCCCCTTTTTGGGTCCATCTTCCAAAACTTAGAAGCTACGTTCCATGAAAATCTACTGGAAAAAGAAAATGAGGTTCCACCAAGGGAGAGCCCCTAG 1692 39.78 MLPLFVYGGTSAGKTSVILQIFRHLNRPFVYSSCRTCYSLRTLFDCILNQLLLHQKDADNGYLSAKRCEKPSDFVNFLREALVKVVKTLQGNPGKLGTKKLTGQEHGHMIYLIFDNLELVRDWDKSSSILPFLFNLHEVLNMNEVGFLFISNTSPDAYYSNMGYLEPIPVYFSEYTEDDLRKIFMRNQTNQEMYSSFLSVVLGPFYRITRQVNELSLTFSSLYKTYCEASDDLNNVPNESSKRTRFSHFQPHIAPALNQIFKISSPLSEVNNLKEAKRKGGSMKFSGCDSSEHLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGTSSRKKRKRPSEKSIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAEISLEDEQGNVLMESQNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMALKVARSIKFPLSKCQEHVASTTYLLDSIAQQWLNDELERRNGLDLIHEEEKYRKFLMMVSYQLLLYGFKNSRDKKRKTVDYFSNVLVVQKCCPLFGSIFQNLEATFHENLLEKENEVPPRESP 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5160915 5168582 + CrPI670011_06g011300.1 Cre06g1130 500592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g1130 563 FunFam Origin of replication complex subunit 5 1 161 - -
Cre06g1130 563 Pfam AAA ATPase domain 4 139 IPR041664 -
Cre06g1130 563 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 298 453 IPR047088 -
Cre06g1130 563 MobiDBLite consensus disorder prediction 322 346 - -
Cre06g1130 563 Pfam ORC5, lid domain 194 242 IPR048866 -
Cre06g1130 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 187 IPR027417 -
Cre06g1130 563 Gene3D - 2 159 IPR027417 -
Cre06g1130 563 MobiDBLite consensus disorder prediction 330 346 - -
Cre06g1130 563 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 2 453 IPR020796 GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g1130 K02607 - csv:101223023 827.009