Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre06g1131 | ATGGACGTGGGATTCGCGTTAGTTATAGTAACGGCAGTAACGGCGTATCTTCTTTGGTTTACTTTCATTTCACGGTCGTTAAAAGGTCCTCAAATGTGGCCGTTACTTGGCAGCCTCCCTGGGTTGATAGAAAATTGCGACCGTCTACACGACTGGATCTCCGACAACCTCCGCGCGTGTGGCGGCACGTATCAAACCTGCATCTGGGCTTTCCCTTTCTTCGCTAAAAAGCAAGGCCTCGTGACTGTCACGTGTGACCCGAGAAATCTGGAACATATTCTCAAGACCCGATTCGATAATTACCCTAAAGGCCCCACTTGGCAAGCTGTTTTTCACGAGTTACTTGGACAAGGCATTTTTAACTCCGACGGTGACACCTGGCTTTTCCAGAGAAAAACTGCTGCTTTGGAATTTACTACTAGAACCCTTCGTCAAGCCATGGCTCGATGGGTTAGCCGAGCTATTAAGTTGAGGTTTTGCCCTATTCTTAAACAAGCCCAGCTCAATTCTCAACCCATTGATCTTCAGGATCTGTTGTTACGTCTTACTTTTGATAATATTTGTGGCTTGGCTTTTGGTAAAGATCCCATGACTTGCGCGCCGGGTTTCCCCGAAAATGGCTTTGCTATGGCTTTCGATCGAGCCACCGAGGCTTCCTTGCAACGCTTTATTCTACCGGAAGTGCTTTGGAAATTCAAAAAGTGGCTTCGGCTTGGAATGGAAGTCAGCTTGAGCCGGAGCTTAGTCCATATTGAGGAGTATTTATCCAGTGTGATTGATTCACGTAAGCTCGAGTTGCTTAATCAGCCCAAAGACTCCACCTCACATGATGATTTGTTGTCACGTTTCATGAAGAAGAAGGATGGTAATTACTCCAACGCGTTCCTCCGCCACGTCGCGCTTAATTTCATCCTAGCTGGACGAGACACGTCATCCGTTGCGCTGAGCTGGTTTTTCTGGTTGGTAACATTAAACCCGCTCATTGAAGAAAAAATACTCCGCGAGATCTGCACCGTTCTGATTGAGACACGTGGAAATAACATCCAATCATGGCTCGAGGAACCGTTAGGATTCGAAGAGGTCGACCGTCTGATTTATCTCAAAGCCGCTCTCACCGAAACCCTAAGATTGTACCCGTCAGTGCCGGAGGATTCAAAGCACGTCGTCGCCGACGACGTTCTGCCGGATGGAACCTTCGTTCCGGCGGGATCGTCAGTGACTTATTCCATCTATTCCACCGGAAGAATGAAGTCGACGTGGGGAGAAGACTGCCTGGAATTCCGGCCGGAGCGGTGGTTGACGGCGGACGGAAAGAAATTCATACCGTACGATCCGTACAAATTCGTAGCGTTCAATGCAGGGCCGAGGATCTGCTTAGGGAAGGATTTGGCGTATTTACAGATGAAGTCGATAGCGGCTGCGGTGCTACTTCGGCACCGGCTGACGGTGGCGGCGGGGCATAAGGTGGAGCAAAAAATGTCGTTGACGCTGTTTATGAAGTACGGGCTGAAGGTGAACGTTCACCGGAGGGATTTGGAGGGAATTGTGGAAAGTATCAGGGGCAAATACGGAAATTGGCAAGGGAAAGATGCTCCGTTAGTCGCCGTGGTGAACTGCAACGGCGGGTGTAACGGATTTAACGAAGTACCATGCTAA | 1656 | 49.28 | MDVGFALVIVTAVTAYLLWFTFISRSLKGPQMWPLLGSLPGLIENCDRLHDWISDNLRACGGTYQTCIWAFPFFAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHELLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILKQAQLNSQPIDLQDLLLRLTFDNICGLAFGKDPMTCAPGFPENGFAMAFDRATEASLQRFILPEVLWKFKKWLRLGMEVSLSRSLVHIEEYLSSVIDSRKLELLNQPKDSTSHDDLLSRFMKKKDGNYSNAFLRHVALNFILAGRDTSSVALSWFFWLVTLNPLIEEKILREICTVLIETRGNNIQSWLEEPLGFEEVDRLIYLKAALTETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSTGRMKSTWGEDCLEFRPERWLTADGKKFIPYDPYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHKVEQKMSLTLFMKYGLKVNVHRRDLEGIVESIRGKYGNWQGKDAPLVAVVNCNGGCNGFNEVPC | 551 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 5176425 | 5178080 | + | CrPI670011_06g011310.1 | Cre06g1131 | 500593 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre06g1131 | 551 | Pfam | Cytochrome P450 | 28 | 496 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | PRINTS | P450 superfamily signature | 458 | 469 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | PANTHER | CYTOCHROME P450 | 18 | 503 | - | - | |
| Cre06g1131 | 551 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | Gene3D | Cytochrome P450 | 24 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre06g1131 | 551 | FunFam | Cytochrome P450 | 21 | 513 | - | - | |
| Cre06g1131 | 551 | SUPERFAMILY | Cytochrome P450 | 21 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1131 | 551 | CDD | CYP86A | 67 | 503 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre03g0403 | Cre-Chr3:2485801 | Cre06g1131 | Cre-Chr6:5176425 | 1.30E-194 | dispersed | |
| Cre06g1131 | Cre-Chr6:5176425 | Cre09g0432 | Cre-Chr9:4158133 | 1.30E-123 | dispersed | |
| Cre06g1131 | Cre-Chr6:5176425 | Cre09g2262 | Cre-Chr9:41802119 | 1.60E-230 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre06g1131 | K15398 | - | csv:101221526 | 1080.09 |