Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre06g1172 | ATGTGGGAGCCCTCCTTGGTAGTGTGGACATTTTTAATTCTTACATTGTTGTCCATTACTTTCCTTTCAAAAATACTTAAAAATGGAAAGTACATTGGCCAAGATGATCAAAGTCAGAGGAGATACAAATTTCCTCCAGGGAGAAGAAGCTGGCCTGTTATAGGTGATAGCTTCCATTGGTACTATGCCATTGCAAGTTCTCATCCTTCCAAGTATGTTGAAGAACAGGCCAAAAGATATGGGAAGATCTTCTCGTGTCGTGTTTTTGGAAAATGCACAGTGGTATCGATCGATCCAGAATTTAATAGGTATGTGATGCAAAACGAAGGAACGTTGTTTCAATCAAGTTATCCCAAATCTTTCCGAGATTTGGTAGGCCTCAATGGTGTCATCACAGTCCAAGGGGAACAACAAAGGAAACTCCACGCAATTGCTTCCAATTTTATGCGTATAAACAAACTCAACTTTAGCTTCCTAAAAGATATTCAAACCATAATTATCCATTCCTTGACCACTTTCCATGACGGTCATCAAGTTATATCTCTCCAAGATGCTTGCAGGAAGATTGCCATTAATCTAATGGTAAGTCAACTATTGGGTGTATCAAGTGAATCTGAAGTGAATGAAATTAGTCAGTTATTTTACGACTTCGTGGATGGCTGTCTATCTATTCCTATCAACTTGCCTGGCTTTGCCTATTACAATGCAATGAAGGCAAGGAAGCAAATCATAAGCAAAATTAAGAAGAAAATAAAGATACACAAATCAGGCGTAGCAATGGAAACGAGCGGGCAGGAAGTGCTTGCAAGACTATTAGAAGAACAAAAGTACTTATCGGATGAGGCAGTTGAAGATTTCATCATCAATCTTCTTTTTGCTGGAAACGAAACCACTTCTAAAACGATGCTTTTCGCAGTCTATTACCTAACCCACTCACCAAAAGCAATGAAGCAACTCCTGGATGAACAAGATGCTTTAAGAAATGAGTATGGAGATAATACAATCACATGGCAGGATTACAAATCAATGCCCTTTACCCAGTGTGTTATTGATGAGACGCTTCGACTCGGAGGAATTGCAATTTGGTTGATGAGGGAGACAAAAGAAGAGATCAAATACTCAGATTACGTGATTCCAAAGGGAACCTTTGTTGTTCCATTTCTTTGTGCTGTACATTTGGACGAGAATATATATGATGGAGCTTTAACTTTTAACCCTTGGAGATGGATGGAGCTTAAAAATCAGGAAATGAGAAATTGGAGGAATAGCCCATTCTTTGCTCCATTTGGAGGAGGTGGTAGGCTGTGTCCGGGAGCAGAATTGGCCCGTCTCCAAATTGCTTTATTTCTCCACCACTTTGTTACCAAGTACAGGTGGACACAAATTAAAGCAGATAGAATGTCTTTCTTTCCGTCTGCTCGGCTAGTCAACGGCTTCCAAATTCGCTTGGAAAAATGGGAACACTGA | 1467 | 39.88 | MWEPSLVVWTFLILTLLSITFLSKILKNGKYIGQDDQSQRRYKFPPGRRSWPVIGDSFHWYYAIASSHPSKYVEEQAKRYGKIFSCRVFGKCTVVSIDPEFNRYVMQNEGTLFQSSYPKSFRDLVGLNGVITVQGEQQRKLHAIASNFMRINKLNFSFLKDIQTIIIHSLTTFHDGHQVISLQDACRKIAINLMVSQLLGVSSESEVNEISQLFYDFVDGCLSIPINLPGFAYYNAMKARKQIISKIKKKIKIHKSGVAMETSGQEVLARLLEEQKYLSDEAVEDFIINLLFAGNETTSKTMLFAVYYLTHSPKAMKQLLDEQDALRNEYGDNTITWQDYKSMPFTQCVIDETLRLGGIAIWLMRETKEEIKYSDYVIPKGTFVVPFLCAVHLDENIYDGALTFNPWRWMELKNQEMRNWRNSPFFAPFGGGGRLCPGAELARLQIALFLHHFVTKYRWTQIKADRMSFFPSARLVNGFQIRLEKWEH | 488 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 5558709 | 5569134 | + | CrPI670011_06g011720.1 | Cre06g1172 | 500634 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre06g1172 | 488 | SUPERFAMILY | Cytochrome P450 | 39 | 484 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | PANTHER | CYTOCHROME P450 26 | 43 | 457 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Cre06g1172 | 488 | PRINTS | E-class P450 group IV signature | 376 | 390 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | PRINTS | E-class P450 group IV signature | 392 | 410 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | PRINTS | E-class P450 group IV signature | 71 | 94 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | PRINTS | E-class P450 group IV signature | 436 | 454 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | PRINTS | E-class P450 group IV signature | 343 | 359 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | PRINTS | E-class P450 group IV signature | 284 | 310 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | PRINTS | E-class P450 group IV signature | 420 | 436 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | CDD | CYP90-like | 78 | 485 | - | - | |
| Cre06g1172 | 488 | PRINTS | P450 superfamily signature | 427 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | PRINTS | P450 superfamily signature | 293 | 310 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | PRINTS | P450 superfamily signature | 348 | 359 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | PRINTS | P450 superfamily signature | 436 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 429 | 438 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre06g1172 | 488 | Pfam | Cytochrome P450 | 45 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1172 | 488 | Gene3D | Cytochrome P450 | 34 | 486 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre06g1172 | Cre-Chr6:5558709 | Cre07g1284 | Cre-Chr7:26888916 | 1.80E-81 | dispersed | |
| Cre06g1172 | Cre-Chr6:5558709 | Cre09g0053 | Cre-Chr9:821641 | 5.00E-79 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre06g1172 | - | - | - | 0.0 |