Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g1172 ATGTGGGAGCCCTCCTTGGTAGTGTGGACATTTTTAATTCTTACATTGTTGTCCATTACTTTCCTTTCAAAAATACTTAAAAATGGAAAGTACATTGGCCAAGATGATCAAAGTCAGAGGAGATACAAATTTCCTCCAGGGAGAAGAAGCTGGCCTGTTATAGGTGATAGCTTCCATTGGTACTATGCCATTGCAAGTTCTCATCCTTCCAAGTATGTTGAAGAACAGGCCAAAAGATATGGGAAGATCTTCTCGTGTCGTGTTTTTGGAAAATGCACAGTGGTATCGATCGATCCAGAATTTAATAGGTATGTGATGCAAAACGAAGGAACGTTGTTTCAATCAAGTTATCCCAAATCTTTCCGAGATTTGGTAGGCCTCAATGGTGTCATCACAGTCCAAGGGGAACAACAAAGGAAACTCCACGCAATTGCTTCCAATTTTATGCGTATAAACAAACTCAACTTTAGCTTCCTAAAAGATATTCAAACCATAATTATCCATTCCTTGACCACTTTCCATGACGGTCATCAAGTTATATCTCTCCAAGATGCTTGCAGGAAGATTGCCATTAATCTAATGGTAAGTCAACTATTGGGTGTATCAAGTGAATCTGAAGTGAATGAAATTAGTCAGTTATTTTACGACTTCGTGGATGGCTGTCTATCTATTCCTATCAACTTGCCTGGCTTTGCCTATTACAATGCAATGAAGGCAAGGAAGCAAATCATAAGCAAAATTAAGAAGAAAATAAAGATACACAAATCAGGCGTAGCAATGGAAACGAGCGGGCAGGAAGTGCTTGCAAGACTATTAGAAGAACAAAAGTACTTATCGGATGAGGCAGTTGAAGATTTCATCATCAATCTTCTTTTTGCTGGAAACGAAACCACTTCTAAAACGATGCTTTTCGCAGTCTATTACCTAACCCACTCACCAAAAGCAATGAAGCAACTCCTGGATGAACAAGATGCTTTAAGAAATGAGTATGGAGATAATACAATCACATGGCAGGATTACAAATCAATGCCCTTTACCCAGTGTGTTATTGATGAGACGCTTCGACTCGGAGGAATTGCAATTTGGTTGATGAGGGAGACAAAAGAAGAGATCAAATACTCAGATTACGTGATTCCAAAGGGAACCTTTGTTGTTCCATTTCTTTGTGCTGTACATTTGGACGAGAATATATATGATGGAGCTTTAACTTTTAACCCTTGGAGATGGATGGAGCTTAAAAATCAGGAAATGAGAAATTGGAGGAATAGCCCATTCTTTGCTCCATTTGGAGGAGGTGGTAGGCTGTGTCCGGGAGCAGAATTGGCCCGTCTCCAAATTGCTTTATTTCTCCACCACTTTGTTACCAAGTACAGGTGGACACAAATTAAAGCAGATAGAATGTCTTTCTTTCCGTCTGCTCGGCTAGTCAACGGCTTCCAAATTCGCTTGGAAAAATGGGAACACTGA 1467 39.88 MWEPSLVVWTFLILTLLSITFLSKILKNGKYIGQDDQSQRRYKFPPGRRSWPVIGDSFHWYYAIASSHPSKYVEEQAKRYGKIFSCRVFGKCTVVSIDPEFNRYVMQNEGTLFQSSYPKSFRDLVGLNGVITVQGEQQRKLHAIASNFMRINKLNFSFLKDIQTIIIHSLTTFHDGHQVISLQDACRKIAINLMVSQLLGVSSESEVNEISQLFYDFVDGCLSIPINLPGFAYYNAMKARKQIISKIKKKIKIHKSGVAMETSGQEVLARLLEEQKYLSDEAVEDFIINLLFAGNETTSKTMLFAVYYLTHSPKAMKQLLDEQDALRNEYGDNTITWQDYKSMPFTQCVIDETLRLGGIAIWLMRETKEEIKYSDYVIPKGTFVVPFLCAVHLDENIYDGALTFNPWRWMELKNQEMRNWRNSPFFAPFGGGGRLCPGAELARLQIALFLHHFVTKYRWTQIKADRMSFFPSARLVNGFQIRLEKWEH 488
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 5558709 5569134 + CrPI670011_06g011720.1 Cre06g1172 500634
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre06g1172 488 SUPERFAMILY Cytochrome P450 39 484 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 PANTHER CYTOCHROME P450 26 43 457 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Cre06g1172 488 PRINTS E-class P450 group IV signature 376 390 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 PRINTS E-class P450 group IV signature 392 410 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 PRINTS E-class P450 group IV signature 71 94 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 PRINTS E-class P450 group IV signature 343 359 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 PRINTS E-class P450 group IV signature 284 310 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 PRINTS E-class P450 group IV signature 420 436 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 CDD CYP90-like 78 485 - -
Cre06g1172 488 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre06g1172 488 Pfam Cytochrome P450 45 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1172 488 Gene3D Cytochrome P450 34 486 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g1172 Cre-Chr6:5558709 Cre07g1284 Cre-Chr7:26888916 1.80E-81 dispersed
Cre06g1172 Cre-Chr6:5558709 Cre09g0053 Cre-Chr9:821641 5.00E-79 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g1172 - - - 0.0