Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g1221 ATGGCATTTTGGTGGACTCTGCTTGTTCTTGGATTTGCTTACGCGATCTGTAGGTTACTTTTGATGCTTATCCCTCCGAATGTGCCTTCAATCGAAGTTGACGCATCTGACGTTATGGACGACGGGAATCAGACGCAGGAGAATAGCTACATCTACATTCCACCTAGGGTAAAGACACAACAGCAAGACAAGAGAGTCCAGTGTTACGAGCCTGCAACTATGAAATACCTGGGCTATTTTCCTGCATTGTCACGAGATGAGGTCAAGGAGCGTGTTGCTTCAGCCAGGAAAGCGCAGAAAGAATGGGCCAAAAGTAGCTTCAAGCAAAGGCGTTTGCTTTTACGGATACTTTTGAAGTACATTATTGAACATCAAGAGCTCATTTGCGAGATCTCCTCCCGTGAAACTGGAAAAACAATAGTGGATGCTAATATGGGAGAAGTAATGGCGACATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCCGATCATGTGGAAGGGCAACACTTCACAAGAAAGCCCGAGTAGAATTTCATCCCCTTGGAGTTATTGGGGCGATAGTCCCATGGAACTATCCATTCCATAACATTTTCAATCCAGTGCTTGCAGCAGTCTTTGCAGGAAACGGCATTGTAGTTAAGGTTTCAGAACATGCAAGTTGGTCAGGATGCTTTTATATCAGGATTATCCAAGCTGCACTTGCTGCTGTTGGAGCTCCTGAGAGTTTGGTTGATGTGATAACAGGGTTTGCTGAAACAGGTGAAGCGCTAGTGTCTTCAGTAGACAAAATGATATTCGTTGGATCTACTGGTGTGGGTAGGATGATAATGAAAACTGCTGCTGAGACACTTATTCCAGTTACTCTTGAGTTGGGTGGAAAGGACGCATTTATTGTGTGTGAGGATGTAGATCTGGATCATGTGGTAAACGTTGCTCTCAGGGCTTCTATTACATCAAGTGGACATAATTGTACTGGAGCTGAGAGATTTTATGTCCACAAGAACATTTATTCTTCGTTTGTGGATAAAATATCAGAACGTGTAAAGGCTATTACAGTTGGTCCACCGTTAGCTGGGAAATATGATATGGGTGCCATCTGTACGCAAGAGCAGTCTGAGAAACTTCAAAGCCTTGTAAATGATGCCTTAGACAGAGGGGCTAAAATTGTTGCTCGTGGAACTTTTGGACATTTACCTGAAGGTGCCGTTGATCAATATTTCCCGCCTACCGTTATTGTTGATGTCAACCATACAATGAAGTTAATGCAAGAGGAGGCATTTGGACCAATCCTGCCTATAATGAAATTCACCACAGATGATGAGGCCGTGAATCTTGCAAATGATTCAAGGTTTGGGCTTGGTTGTGCTGTCTTCTCTGGCAGTCAGCGGCGTGCCAAGAACATTGCTTCGCAGATACATACTGGAAGTGTTGCAATTAATGACTTTGCCACAAATTATTTGTGTCAGTCCTTGCCATTTGGTGGTGTAAAAGAGAGTGGATTCGGTCGATTTGCGGGCGTTGAAGGATTACGAGCTTGTTGTCTCGTTAAAGCAGTTGTTGAGGATAGGTGGTGGCCATACATTCAGACCAAGCATCCGAAGCCTCTTACGTATCCTGTTGCAGACAACGCCTTTGAGTTTCAGATGTCACTTGTCGAAGCAACGTATGGGCTGAACATATGGGATCGATTAAGAGCATTGGTCAATGTTCTGAAGATGCTGTCCGAGCAGAACACTCCGTCTAAAGACAACTCTACCATTGATGATGAAAGTAAGAGAGCTGATTGA 1812 44.09 MAFWWTLLVLGFAYAICRLLLMLIPPNVPSIEVDASDVMDDGNQTQENSYIYIPPRVKTQQQDKRVQCYEPATMKYLGYFPALSRDEVKERVASARKAQKEWAKSSFKQRRLLLRILLKYIIEHQELICEISSRETGKTIVDANMGEVMATCEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNIFNPVLAAVFAGNGIVVKVSEHASWSGCFYIRIIQAALAAVGAPESLVDVITGFAETGEALVSSVDKMIFVGSTGVGRMIMKTAAETLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCTGAERFYVHKNIYSSFVDKISERVKAITVGPPLAGKYDMGAICTQEQSEKLQSLVNDALDRGAKIVARGTFGHLPEGAVDQYFPPTVIVDVNHTMKLMQEEAFGPILPIMKFTTDDEAVNLANDSRFGLGCAVFSGSQRRAKNIASQIHTGSVAINDFATNYLCQSLPFGGVKESGFGRFAGVEGLRACCLVKAVVEDRWWPYIQTKHPKPLTYPVADNAFEFQMSLVEATYGLNIWDRLRALVNVLKMLSEQNTPSKDNSTIDDESKRAD 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6087745 6096344 + CrPI670011_06g012210.1 Cre06g1221 500683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g1221 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491(InterPro)
Cre06g1221 603 FunFam aldehyde dehydrogenase 22A1 65 317 - -
Cre06g1221 603 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491(InterPro)
Cre06g1221 603 FunFam Aldehyde dehydrogenase A 301 495 - -
Cre06g1221 603 CDD ALDH_F15-22 69 531 - -
Cre06g1221 603 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491(InterPro)
Cre06g1221 603 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 55 528 - -
Cre06g1221 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620(InterPro)
Cre06g1221 603 SUPERFAMILY ALDH-like 50 529 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2024 Cre-Chr2:33729693 Cre06g1221 Cre-Chr6:6087745 7.60E-46 dispersed
Cre06g1221 Cre-Chr6:6087745 Cre06g2537 Cre-Chr6:33005941 3.90E-57 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g1221 - - - 0.0