Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g1337 ATGTTTTTTCTTGGGATGAAGTTGGATTCCAACCTCATAAAGTCGGATTCTGAATCGATCAAATTCCACAAGAAACTCGAAAATTTTCCTGGGGTAGGAAAAGAACGAACTTATAGAACTTGGATTCTTCGGTTTTCTACTATGGAAATGGATCGTGATGATTTGAGTGTTCGATTATCTGCTCTATGGAACATCATTGGTCTAAAGAGAAGCCTTAAAGAGGACAGAATTCCTTGCCAAATTGAAGAGGGTCTGTTCTTAGGCTCTGTTGGAGCTGCCCATAACAAAGATCAATTGAAGAAATTGAATGTCACTCACATTTTAACCATTGCTTGTTCTTTGCCACCTGCTGATCCAAATGATTTTGTATGTAAAGTAGTTGGTGTCTTGGACACTAGAGATGCAGATATTAAACAACACTTTGATGATTGTTTCAATTTTATCGATGAGGGAAGACAATCTGGTGGAGGGGTCTTGATTCATTGCTTTGCTGGAATATCCAGAAGTGTAACCATTACAGTTGCCTATCTGATGAAAAAGCGTGGTATGAATCTAACTCAAGCATTGGAACACGTCAAGAGTAGACGACCGCAGGCAGCTCCAAATGTTGGTTTCATGGTTCAACTCAAGGACTTTGAAACAGCTCTTCAAGCTAGCAGATGA 663 39.52 MFFLGMKLDSNLIKSDSESIKFHKKLENFPGVGKERTYRTWILRFSTMEMDRDDLSVRLSALWNIIGLKRSLKEDRIPCQIEEGLFLGSVGAAHNKDQLKKLNVTHILTIACSLPPADPNDFVCKVVGVLDTRDADIKQHFDDCFNFIDEGRQSGGGVLIHCFAGISRSVTITVAYLMKKRGMNLTQALEHVKSRRPQAAPNVGFMVQLKDFETALQASR 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7423493 7427301 - CrPI670011_06g013370.1 Cre06g1337 500799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g1337 220 FunFam Dual specificity phosphatase 12 79 219 - -
Cre06g1337 220 Gene3D Protein tyrosine phosphatase superfamily 71 220 IPR029021 -
Cre06g1337 220 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 139 197 IPR000387 GO:0016311(InterPro)
Cre06g1337 220 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 78 217 IPR029021 -
Cre06g1337 220 ProSiteProfiles Dual specificity protein phosphatase domain profile. 77 218 IPR020422 GO:0006470(InterPro)
Cre06g1337 220 SMART dsp_5 77 215 IPR020422 GO:0006470(InterPro)
Cre06g1337 220 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 57 215 - GO:0004721(PANTHER)|GO:0008330(PANTHER)|GO:0017017(PANTHER)|GO:0033550(PANTHER)|GO:0043409(PANTHER)
Cre06g1337 220 Pfam Dual specificity phosphatase, catalytic domain 85 214 IPR000340 GO:0016311(InterPro)
Cre06g1337 220 CDD DSP 78 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g1337 Cre-Chr6:7423493 Cre10g1510 Cre-Chr10:29022842 3.30E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g1337 - - - 0.0