Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre06g1337 | ATGTTTTTTCTTGGGATGAAGTTGGATTCCAACCTCATAAAGTCGGATTCTGAATCGATCAAATTCCACAAGAAACTCGAAAATTTTCCTGGGGTAGGAAAAGAACGAACTTATAGAACTTGGATTCTTCGGTTTTCTACTATGGAAATGGATCGTGATGATTTGAGTGTTCGATTATCTGCTCTATGGAACATCATTGGTCTAAAGAGAAGCCTTAAAGAGGACAGAATTCCTTGCCAAATTGAAGAGGGTCTGTTCTTAGGCTCTGTTGGAGCTGCCCATAACAAAGATCAATTGAAGAAATTGAATGTCACTCACATTTTAACCATTGCTTGTTCTTTGCCACCTGCTGATCCAAATGATTTTGTATGTAAAGTAGTTGGTGTCTTGGACACTAGAGATGCAGATATTAAACAACACTTTGATGATTGTTTCAATTTTATCGATGAGGGAAGACAATCTGGTGGAGGGGTCTTGATTCATTGCTTTGCTGGAATATCCAGAAGTGTAACCATTACAGTTGCCTATCTGATGAAAAAGCGTGGTATGAATCTAACTCAAGCATTGGAACACGTCAAGAGTAGACGACCGCAGGCAGCTCCAAATGTTGGTTTCATGGTTCAACTCAAGGACTTTGAAACAGCTCTTCAAGCTAGCAGATGA | 663 | 39.52 | MFFLGMKLDSNLIKSDSESIKFHKKLENFPGVGKERTYRTWILRFSTMEMDRDDLSVRLSALWNIIGLKRSLKEDRIPCQIEEGLFLGSVGAAHNKDQLKKLNVTHILTIACSLPPADPNDFVCKVVGVLDTRDADIKQHFDDCFNFIDEGRQSGGGVLIHCFAGISRSVTITVAYLMKKRGMNLTQALEHVKSRRPQAAPNVGFMVQLKDFETALQASR | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7423493 | 7427301 | - | CrPI670011_06g013370.1 | Cre06g1337 | 500799 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre06g1337 | 220 | FunFam | Dual specificity phosphatase 12 | 79 | 219 | - | - | |
Cre06g1337 | 220 | Gene3D | Protein tyrosine phosphatase superfamily | 71 | 220 | IPR029021 | - | |
Cre06g1337 | 220 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 139 | 197 | IPR000387 | GO:0016311(InterPro) | |
Cre06g1337 | 220 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 78 | 217 | IPR029021 | - | |
Cre06g1337 | 220 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 77 | 218 | IPR020422 | GO:0006470(InterPro) | |
Cre06g1337 | 220 | SMART | dsp_5 | 77 | 215 | IPR020422 | GO:0006470(InterPro) | |
Cre06g1337 | 220 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE | 57 | 215 | - | GO:0004721(PANTHER)|GO:0008330(PANTHER)|GO:0017017(PANTHER)|GO:0033550(PANTHER)|GO:0043409(PANTHER) | |
Cre06g1337 | 220 | Pfam | Dual specificity phosphatase, catalytic domain | 85 | 214 | IPR000340 | GO:0016311(InterPro) | |
Cre06g1337 | 220 | CDD | DSP | 78 | 211 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g1337 | Cre-Chr6:7423493 | Cre10g1510 | Cre-Chr10:29022842 | 3.30E-14 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre06g1337 | - | - | - | 0.0 |