Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre06g1415 | ATGGCTCGGGACGGGCATGTAGTGCCAGTGGATCCACAGACGGTGCTGACTGTGAAGAAGAAGAAACAGTCTTCTCGGAATTGGATTCTACTGGATTGTACGGGCCAAGGGACCGTCCTCGATGTCGACAAGCATGCTATTATGCATCGAGTTCAAATTCATGCTCGAGACCTTCGGATTCTTGATCCTTTGCTTTCTTATCCCTCCACGATTTTAGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTGCTTAGAGATCCGACAGATGAACATGTCATCCCTGTGGTTGAGGAGCTGCAGAGGCGACTGCCTCCTTCTAATGCCTTCCAGTTTCAAGTTCAAGGAGATGGTAAAGAGTATCAGGGCCAACATGATGACTCGCCATTTGAATTTCGTGCCCTTGAAGTTGCTTTGGAAGCCATATGTAGTTTTCTTGCTGCACGGACAACTGAACTGGAGACTGCTGCTTATCCTGCCTTGGATGAGCTTACTGCCAAGATTAGTAGCCGCAACTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACCAGGTTGACTGCGAGGGTTCAAAAGGTGAGAGATGAGCTTGAACAATTACTGGACGATGATGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAGTTCATCCTCTCCTGTAAGTGGTTCTGGTCCTGCTAATTGGTTTCCTGCCTCTCCTACAATTGGTTCAAAAATCTCAAGAGCAAGCAGAGCAAGTGTTGCAACTGTACGAGGGGATGAGGATGATATTGAGGAGCTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGAACATTGAACAAATTAACTACACTGCGAGAATATATTGACGACACAGAAGATTATATTAATATCCAGCTTGACAATCACCGAAATCAACTCATTCAGTTGGAGCTCTTTTTAAGTTCTGGAACTGTTTGTTTGTCTATCTATTCTTTGGTGAGTGCAATATTCGGCATGAACATTCCATACACTTGGAATGACGATCACGGATACATGTTTAAATGGGTTGTCATTGTTTCTGGAGTAGCTTGCGCGGTGTTGTTTGTCACAATTATTTACTATGCTCGCTACAAAGGTTTGGTGGGATCTTGA | 1161 | 44.1 | MARDGHVVPVDPQTVLTVKKKKQSSRNWILLDCTGQGTVLDVDKHAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVLLRDPTDEHVIPVVEELQRRLPPSNAFQFQVQGDGKEYQGQHDDSPFEFRALEVALEAICSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKMSSSSPVSGSGPANWFPASPTIGSKISRASRASVATVRGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVSAIFGMNIPYTWNDDHGYMFKWVVIVSGVACAVLFVTIIYYARYKGLVGS | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 8444609 | 8449057 | + | CrPI670011_06g014150.1 | Cre06g1415 | 500877 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre06g1415 | 386 | Gene3D | - | 14 | 99 | - | - | |
Cre06g1415 | 386 | FunFam | Magnesium transporter MRS2-1 | 16 | 99 | - | - | |
Cre06g1415 | 386 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 13 | 383 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
Cre06g1415 | 386 | Pfam | Magnesium transporter MRS2-like | 40 | 229 | - | - | |
Cre06g1415 | 386 | Pfam | Magnesium transporter MRS2-like | 266 | 313 | - | - | |
Cre06g1415 | 386 | CDD | Mrs2_Mfm1p-like | 28 | 383 | IPR039204 | - | |
Cre06g1415 | 386 | Coils | Coil | 187 | 214 | - | - | |
Cre06g1415 | 386 | Gene3D | Magnesium transport protein CorA, transmembrane region | 104 | 316 | - | - | |
Cre06g1415 | 386 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 322 | 374 | IPR045863 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g1415 | Cre-Chr6:8444609 | Cre08g0982 | Cre-Chr8:22943810 | 1.20E-64 | dispersed | |
Cre02g1047 | Cre-Chr2:8353547 | Cre06g1415 | Cre-Chr6:8444609 | 7.30E-78 | transposed | |
Cre05g1128 | Cre-Chr5:10719974 | Cre06g1415 | Cre-Chr6:8444609 | 2.40E-82 | transposed | |
Cre10g1438 | Cre-Chr10:28110223 | Cre06g1415 | Cre-Chr6:8444609 | 8.50E-87 | transposed | |
Cre06g1415 | Cre-Chr6:8444609 | Cre07g0431 | Cre-Chr7:1999281 | 9.30E-145 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre06g1415 | K16075 | - | csv:101203841 | 688.337 |