Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g1458 ATGAGCCAACAAGTGGGAGTGCTAAATGCACTCGACATTGCAAAAACCCAATGGTACCATTTCACTGCAATCATCATCGCCGGAATGGGTTTCTTCACCGACGCCTACGATCTCTTCTGCATCTCCATCGTCACTAAACTCCTCGGCCGTATCTATTACCATATTCCAAATTCCCCCAGACCCGGCTCCCTCCCCCCCAACATCGCCGCCGCCGTCAACGGCGTCGCCTTCTGCGGCACCCTCAGCGGCCAACTCTTCTTCGGCTGGCTCGGCGACAAGCTCGGCCGCAAGAAAGTCTACGGCATTACCCTCATTCTCATGGTCGTCTGTTCCATCGCCTCCGGCCTCTCCTTCGGCAACTCCCCAAAAGCCGTCATCGCCACCCTCTGTTTCTTCCGTTTCTGGCTCGGCTTCGGAATCGGCGGCGACTACCCTCTCTCCGCCACCATCATGTCCGAATACGCCAACAAAAAAACCCGCGGCGCCTTCATCGCCGCGGTCTTTGCAATGCAAGGCTTCGGAATTTTAGGGGGAGGAATCGTCGCTTTAATCGTCTCTTCCGCTTTCAACAACCGCTTCCCAGCACCACCGTACATGGACAATCCCAACCGCCCCACAATACCGGAGGCCGATTACGTGTGGCGAATCGTCTTAATGTTCGGCGCAATTCCAGCCGCGTTAACTTATTACTGGCGGATGAAAATGCCAGAGACGGCGAGATACACCGCCTTAGTAGCCCAAAATGCAAAACAAGCCGCCGCCGACATGTCGAAAGTGCTGCAAGTGCAACTCGAATTAGCCGAACATGAAAAAACCATGATCGAACCAAATGAAAATCAAAACCGTTTCGGTTTATTCTCTCGCGAATTTGCGAAACGTCATGGGCTCCACTTAGTTGGAACCACCACCACGTGGTTTCTGTTAGACATAGCGTTTTACAGCCAAAATCTCTTCCAGAAAGACATTTTCACCGCCATTGAATGGCTTCCATCGGCGGCGACGATGAGCGAATTAGAAGAATGCTTCAAAATCGCACGTGCTCAGACACTAATTGCCCTTTGCGGGACAGTTCCAGGTTACTGGTTCACGGTGGCGCTCATCGATTACTTGGGGAGATTTTTTATTCAATTGATGGGATTCATAATGATGACGATCTTCATGTTTGCTCTGGCGTTTCCTTACAATCATTGGAAGGAGAAGCCTCACAGAATCGGGTTCGTGGTGATGTATTCGTTGACGTTTTTCTTTGCGAATTTCGGGCCGAATTCGACGACGTTTATAGTGCCGGCGGAGATATTTCCGGCGAGGTTGAGGTCGACATGTCATGGGATATCGGCGGCGGCGGGAAAAGCAGGGGCAATAGTGGGAGCGTTTGGGTTTTTGTATGCAGCGCAGAGTAAGGATCCGAAACTGACGGATCCGGGCTACCCGACGGGGATCGGAGTGAAGAATGCTTTGATTGTGTTGGGATGTGTAAATTTCTTAGGGGCATTGTTTACTCTGTTAGTGCCGGAATCGAAAGGGAAGTCATTGGAGGAGCTGACAGGGGAGAATGACGGGAAGGACAGGAATGGGAATACCATTGCAAATATACCTACCGATGTAAATGTCTAA 1614 51.24 MSQQVGVLNALDIAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRIYYHIPNSPRPGSLPPNIAAAVNGVAFCGTLSGQLFFGWLGDKLGRKKVYGITLILMVVCSIASGLSFGNSPKAVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILGGGIVALIVSSAFNNRFPAPPYMDNPNRPTIPEADYVWRIVLMFGAIPAALTYYWRMKMPETARYTALVAQNAKQAAADMSKVLQVQLELAEHEKTMIEPNENQNRFGLFSREFAKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFTAIEWLPSAATMSELEECFKIARAQTLIALCGTVPGYWFTVALIDYLGRFFIQLMGFIMMTIFMFALAFPYNHWKEKPHRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPKLTDPGYPTGIGVKNALIVLGCVNFLGALFTLLVPESKGKSLEELTGENDGKDRNGNTIANIPTDVNV 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9103398 9105011 + CrPI670011_06g014580.1 Cre06g1458 500920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g1458 537 Gene3D MFS general substrate transporter like domains 19 266 IPR036259 -
Cre06g1458 537 Gene3D MFS general substrate transporter like domains 273 531 IPR036259 -
Cre06g1458 537 FunFam Inorganic phosphate transporter 1-6 19 529 - -
Cre06g1458 537 MobiDBLite consensus disorder prediction 513 537 - -
Cre06g1458 537 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cre06g1458 537 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857(InterPro)
Cre06g1458 537 NCBIfam phosphate:H+ symporter 10 517 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cre06g1458 537 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
Cre06g1458 537 CDD MFS_PhT 24 507 - -
Cre06g1458 537 MobiDBLite consensus disorder prediction 521 537 - -
Cre06g1458 537 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 513 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0525 Cre-Chr5:4662610 Cre06g1458 Cre-Chr6:9103398 2.30E-255 dispersed
Cre06g1458 Cre-Chr6:9103398 Cre07g0482 Cre-Chr7:2643673 1.90E-236 dispersed
Cre05g1053 Cre-Chr5:9772274 Cre06g1458 Cre-Chr6:9103398 1.50E-182 transposed
Cre11g2291 Cre-Chr11:34569255 Cre06g1458 Cre-Chr6:9103398 1.40E-138 transposed
Cre05g0524 Cre-Chr5:4646408 Cre06g1458 Cre-Chr6:9103398 1.00E-219 wgd
Cre06g1458 Cre-Chr6:9103398 Cre07g0464 Cre-Chr7:2409442 1.30E-232 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g1458 K08176 - csv:101212412 984.171