Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g1494 ATGGCCGGTGAGGTAGCGGTGGAGGGTGCTGTGGCGGCAGCCGCGGTGGCGACAGAACTAGCCGATTCCAGTCAGCAGTCCCATAAATTGGAGAGAAAATGGACCTTTTGGTTTGATAACCAGTCCAGGCCGAAGCAAGGTGCTGCTTGGGGCACTTCTCTGCGCAAGGTCTATACCTTTGACACCGTTGAAGAATTCTGGTGTTTGTACGATCAGTTATTCAAGCCGAGCAAGTTGCCGGCTAATGCAGATTTTCACCTGTTCAAATCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGGCTAACCTCGATAACATGTGGTTGGAAACGTTGATGGCTTTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGTCAGAGGCAGGACAAACTTGCCCTGTGGACCAAGACAGCAACAAATGAGGCTGCTCAGATGAGCATTGGTAGAAAATGGAAGGAGATTATTGACGTGACCGACAAGATTTCCTTCAGCTTTCATGAGGACTTGAGAAGGGAGAAGTCAGCAAAAGCTCGATACAGTGTTTGA 612 49.18 MAGEVAVEGAVAAAAVATELADSSQQSHKLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQLFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDNMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKISFSFHEDLRREKSAKARYSV 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9585295 9587524 - CrPI670011_06g014940.1 Cre06g1494 500956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g1494 203 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 21 195 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Cre06g1494 203 ProSitePatterns Eukaryotic initiation factor 4E signature. 84 107 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Cre06g1494 203 FunFam Eukaryotic translation initiation factor 4E 19 203 - -
Cre06g1494 203 Pfam Eukaryotic initiation factor 4E 29 185 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cre06g1494 203 Gene3D RNA Cap, Translation Initiation Factor Eif4e 19 203 IPR023398 -
Cre06g1494 203 SUPERFAMILY eIF4e-like 21 196 IPR023398 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0999 Cre-Chr3:8830011 Cre06g1494 Cre-Chr6:9585295 3.70E-59 dispersed
Cre06g1494 Cre-Chr6:9585295 Cre10g1491 Cre-Chr10:28767465 1.50E-24 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g1494 K03259 - csv:101208495 386.726