Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre06g1494 | ATGGCCGGTGAGGTAGCGGTGGAGGGTGCTGTGGCGGCAGCCGCGGTGGCGACAGAACTAGCCGATTCCAGTCAGCAGTCCCATAAATTGGAGAGAAAATGGACCTTTTGGTTTGATAACCAGTCCAGGCCGAAGCAAGGTGCTGCTTGGGGCACTTCTCTGCGCAAGGTCTATACCTTTGACACCGTTGAAGAATTCTGGTGTTTGTACGATCAGTTATTCAAGCCGAGCAAGTTGCCGGCTAATGCAGATTTTCACCTGTTCAAATCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGGCTAACCTCGATAACATGTGGTTGGAAACGTTGATGGCTTTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGTCAGAGGCAGGACAAACTTGCCCTGTGGACCAAGACAGCAACAAATGAGGCTGCTCAGATGAGCATTGGTAGAAAATGGAAGGAGATTATTGACGTGACCGACAAGATTTCCTTCAGCTTTCATGAGGACTTGAGAAGGGAGAAGTCAGCAAAAGCTCGATACAGTGTTTGA | 612 | 49.18 | MAGEVAVEGAVAAAAVATELADSSQQSHKLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQLFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDNMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKISFSFHEDLRREKSAKARYSV | 203 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 9585295 | 9587524 | - | CrPI670011_06g014940.1 | Cre06g1494 | 500956 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre06g1494 | 203 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 21 | 195 | IPR001040 | GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER) | |
Cre06g1494 | 203 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 84 | 107 | IPR019770 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro) | |
Cre06g1494 | 203 | FunFam | Eukaryotic translation initiation factor 4E | 19 | 203 | - | - | |
Cre06g1494 | 203 | Pfam | Eukaryotic initiation factor 4E | 29 | 185 | IPR001040 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cre06g1494 | 203 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 19 | 203 | IPR023398 | - | |
Cre06g1494 | 203 | SUPERFAMILY | eIF4e-like | 21 | 196 | IPR023398 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g0999 | Cre-Chr3:8830011 | Cre06g1494 | Cre-Chr6:9585295 | 3.70E-59 | dispersed | |
Cre06g1494 | Cre-Chr6:9585295 | Cre10g1491 | Cre-Chr10:28767465 | 1.50E-24 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre06g1494 | K03259 | - | csv:101208495 | 386.726 |