Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g1552 ATGGGTGGCGACGGAAAGCTCTTTACATTGGCTGAAGTCTCTCAGCACAATAACCGCAAAGACTGTTGGTTGATCATTAATGCCAAGGTTTACAATGTAACCGAGTTCTTGGAAGACCATCCCGGTGGCGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACTGATGATTTTGAAGATGTGGGTCATAGTGAGAGTGCAAGAGAAATGATGAGCAAATACTACATTGGAGAGATGGACGTGTCGACGATCGCAGAACGGTCGGCATACACAACTCCAAAGCAGCCTCATTACAATGAGGATAAGACGACCGAGTTCATCATCAAGCTCCTCCAGTTCTTGGTTCCTCTCGCAATCTTGGGTTTGGCAGTGGGTATCCGCTTTTACACCAAATCAACCTGA 405 47.16 MGGDGKLFTLAEVSQHNNRKDCWLIINAKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRFYTKST 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10651270 10654885 - CrPI670011_06g015520.1 Cre06g1552 501014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g1552 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 86 IPR036400 -
Cre06g1552 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cre06g1552 134 FunFam Cytochrome b5 type B 3 85 - -
Cre06g1552 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cre06g1552 134 Gene3D - 3 84 IPR036400 -
Cre06g1552 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cre06g1552 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cre06g1552 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cre06g1552 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cre06g1552 134 PANTHER CYTOCHROME B5 6 127 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cre06g1552 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cre06g1552 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g1046 Cre-Chr6:4193297 Cre06g1552 Cre-Chr6:10651270 5.40E-28 dispersed
Cre06g1099 Cre-Chr6:4868051 Cre06g1552 Cre-Chr6:10651270 1.50E-08 dispersed
Cre06g1552 Cre-Chr6:10651270 Cre09g2485 Cre-Chr9:44142096 2.30E-42 dispersed
Cre05g0427 Cre-Chr5:3865275 Cre06g1552 Cre-Chr6:10651270 3.90E-58 wgd
Cre06g1552 Cre-Chr6:10651270 Cre07g0553 Cre-Chr7:3362635 1.30E-48 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g1552 K23490 - csv:101213506 249.98