Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g1573 ATGTCCAAAGAAAACATTGGTATTCCTGGGTTCAGGTATCTCCCCACAAAAAACAATAGAGAAATATGGAAGCTTGAGAAGGAAATAGAATCAATGGTTTTAGAAGTGGTAAAGGAACGAATCAAGCAGTGTTCAAAAGAGAAGGACTTGTTGCAGATAATTCTGGAGGGTGCAAAATGTCTTGATGAAGAGGGTAACTCGTTGAAGATATCTGGAGACAAGTTCATTGTTGATAACTGCAAAAACATATATTTTGCTGGCCATGAGACGACAGCAATAACGGCATCCTGGTGCTTGATGTTATTAGCAAAACACCCAGATTGGCAAGCTCGTGTTCGTTCTGAGGTGCTTGAATGTTGTCAAGATGGGACTCTCGACGCTGAAACCATTAAGAAAATGAAGACGTTGACAATGGTGATTCAAGAGACACTTAGGTTGTACCCCCCAGGAGTTTTTGTCACAAGAGAAGCACTGGAGGACCTAAGATTCAAAAACCTTAGGATTCCAAAAGGGATGAATTTTCAAATTCCAATCTCAATGCTGCATCATAATGTTCATCTCTGGGGACCCGACGTGCTCTCCTTCAATCCCCAGAGGTTCAGTAATGGCATCCTCAAAGCTTGCAAGAATCCGCAAGCTTACATACCGTTCGGGGTCGGCCCTCACATTTGCGCGGGTCAACATTTTGCAATGGTAGAGCTGAAAGTGATTGTGAGCCTTATTGTGTCAAAATTTGAATTCTCTCTTTCACCTTCTTATAACCATTCCCCTGCCTTCAGCTTGGTTGTGGAGCCTAAAAATGGAGTTCTTCTCCATCTAAGGAACCTCTCTTCTTTCTCTTTATAA 846 42.2 MSKENIGIPGFRYLPTKNNREIWKLEKEIESMVLEVVKERIKQCSKEKDLLQIILEGAKCLDEEGNSLKISGDKFIVDNCKNIYFAGHETTAITASWCLMLLAKHPDWQARVRSEVLECCQDGTLDAETIKKMKTLTMVIQETLRLYPPGVFVTREALEDLRFKNLRIPKGMNFQIPISMLHHNVHLWGPDVLSFNPQRFSNGILKACKNPQAYIPFGVGPHICAGQHFAMVELKVIVSLIVSKFEFSLSPSYNHSPAFSLVVEPKNGVLLHLRNLSSFSL 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10918480 10919587 + CrPI670011_06g015730.1 Cre06g1573 501035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g1573 281 PRINTS E-class P450 group IV signature 77 103 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1573 281 PRINTS E-class P450 group IV signature 208 224 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1573 281 PRINTS E-class P450 group IV signature 133 149 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1573 281 PRINTS E-class P450 group IV signature 224 242 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1573 281 SUPERFAMILY Cytochrome P450 8 274 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1573 281 PRINTS P450 superfamily signature 215 224 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1573 281 PRINTS P450 superfamily signature 138 149 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1573 281 PRINTS P450 superfamily signature 224 235 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1573 281 PRINTS P450 superfamily signature 86 103 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1573 281 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 217 226 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre06g1573 281 Gene3D Cytochrome P450 3 277 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g1573 281 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 270 IPR050665 GO:0004497(PANTHER)
Cre06g1573 281 Pfam Cytochrome P450 10 267 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g1573 Cre-Chr6:10918480 Cre11g1031 Cre-Chr11:7710874 5.70E-59 dispersed
Cre06g1573 Cre-Chr6:10918480 Cre07g0914 Cre-Chr7:8414179 3.20E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g1573 K24544 - csv:101207088 489.189