Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g1867 ATGGATCACAATCACTGCAATGGAAACTCTGATTCTCATATCAAAATACCAAAAATCAAGTTCACAAAGCTCTTCATCAATGGACAATTCGTTGACTCAATTTCAGGGAAAACCTTTGAGACCATAGATCCGAGAACCGAGGAGGTTATAACGACGGTCGCCGCTGGGGACAAACAAGACGTTGATTTGGCCGTGAAAGCCGCCCGTGAAGCCTTCGATCATGGCCCTTGGCCCCGCATGTCCGGCGCCGAGAGGGGCAGGATAATGATGAAACTAGCGGAATTGATAGACGAACACATGGAGGAATTAGCAGCGTTGGATACGATCGACGCTGGAAAATCGTTTCTAATGGGAAAGATCGTAGATATACCGGGGGCTGCAAATACGCTACGGTACTACGCAGGAGCAGCCGATAAATTCCACGGCGAAGTATTGAAAATGGCAAAACCGCTTCACGGTTACACGTTACTTGAGCCTATTGGAGTGGTGGGCCACATCATACCGTGGAATTTTCCGACGACCATGTTCTGGTTGAAAGTCAGCCCGGCGTTAGCCGCCGGCTGCACCATGATCGTCAAACCGGCCGAACAAACCCCTCTCTCCGCCCTCTTCTACGCCCATCTCGCCAAATTGGCTGGTATACCAGATGGAGTTCTGAACGTGGTGACTGGATATGGACCGACGGCAGGGTCAGGCATTGCGTCCCACATGGACATTGACAAGGTGAGCTTCACGGGATCAACTAAGGTGGGAAGGCTGGTAATGCAGGCAGCAAGTGCCAGTAATCTGAAGCAAGTGTCCTTGGAATTAGGAGGCAAATCACCCCTTCTAGTCTTTGATGATGCAGATCTGGACAAAGCAGTTGATCTTGCTCTCCTAGCTATTTTTTATAACAAGGGGGAAATTTGCGTGGCTGGCTCCCGGGTTTTGGTTCAAGAAGGGATATACGACGAATTCGTGAAAAAGATTACTGAAAAGGTCAAATCTTGGGTTGTGGGAGACCCTTTTGATCCTAAAGTTAAATATGGACCCCAGGTGGACAAAAAGCAAATGGATAAAATTCTGAAATACATAGAACAGGGTAAAAAGGAAGGGGCAACATTGGTTACTGGCGGCAAGCGTATAGGCGAAGTGGGGTATTACGTTGAGCCCACAATCTTCACAAATGTCAAGGAAGACTCACTAATTGCCCAGGACGAAATATTCGGCCCCGTCCTCTCAGTCATAAAATTCAAGACAATTGAAGACGGAATAAGGAGTGCAAACAACACCAAGTACGGGCTAGCAGCTGGGATAGTGACGAACAGCTTAGACATAGCGAACACAGTGTCTAGGTCGATTCGAGCTGGTACGATTTGGATAAATTGTTACTTCGCTTTTGACCCAAGTTGCCCATTTGGTGGGTACAAGGCCAGTGGATTCGGAAGAGACTCTGGAATGCACGCTATCCAAAAGTATCTTCAAACTAAATCTGTTGTCATTCCTTTGGTTAACACTCCTTGGCTTTGA 1509 47.58 MDHNHCNGNSDSHIKIPKIKFTKLFINGQFVDSISGKTFETIDPRTEEVITTVAAGDKQDVDLAVKAAREAFDHGPWPRMSGAERGRIMMKLAELIDEHMEELAALDTIDAGKSFLMGKIVDIPGAANTLRYYAGAADKFHGEVLKMAKPLHGYTLLEPIGVVGHIIPWNFPTTMFWLKVSPALAAGCTMIVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVTGYGPTAGSGIASHMDIDKVSFTGSTKVGRLVMQAASASNLKQVSLELGGKSPLLVFDDADLDKAVDLALLAIFYNKGEICVAGSRVLVQEGIYDEFVKKITEKVKSWVVGDPFDPKVKYGPQVDKKQMDKILKYIEQGKKEGATLVTGGKRIGEVGYYVEPTIFTNVKEDSLIAQDEIFGPVLSVIKFKTIEDGIRSANNTKYGLAAGIVTNSLDIANTVSRSIRAGTIWINCYFAFDPSCPFGGYKASGFGRDSGMHAIQKYLQTKSVVIPLVNTPWL 502
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 24887395 24891016 + CrPI670011_06g018670.1 Cre06g1867 501329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre06g1867 502 FunFam Aldehyde dehydrogenase3 272 461 - -
Cre06g1867 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620(InterPro)
Cre06g1867 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 22 494 - GO:0004029(PANTHER)
Cre06g1867 502 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 26 294 - -
Cre06g1867 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 490 IPR016162 GO:0016491(InterPro)
Cre06g1867 502 SUPERFAMILY ALDH-like 16 498 IPR016161 GO:0016491(InterPro)
Cre06g1867 502 FunFam Aldehyde dehydrogenase, putative 464 490 - -
Cre06g1867 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491(InterPro)
Cre06g1867 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491(InterPro)
Cre06g1867 502 Pfam Aldehyde dehydrogenase family 30 492 IPR015590 GO:0016491(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g1867 Cre-Chr6:24887395 Cre06g2558 Cre-Chr6:33193422 1.90E-161 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g1867 K12355 - csv:101219029 917.531