Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre06g1911 | ATGAGAAATTGTTTATTAATTAAAGCTAAATCACCATTGAAAGGGACAAAGGAGCTTGCTCTGATCTCCTCTGAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCATGTCTGTCTCATGATGATGCCATTAGTGTACTAAAACTTGATGCTTCTTCCACCTGCTGCTACAGTTACCTTGGAGAAATCATTGAGAGAAAAGAAGTTACAAAAAAAAAGAAAAAAGAAAAAAGAGAAATGCCCTACATGCAAATGGAGCCAGAAGAGAAACACGTGATTCCATCTTCTCAAATGGCATTGAAATCCCACCATGGATCAAATGATGGTGAGAAAACTAATTTATGGAAAAGGAAAGGAAGAAGGAGAGCAAAAGGACCTTCCATGGAAGGTTTGAAGCAAAAGGAACTTGATCGAAACCTGGAGTTTCCCTCTTCTTCTTCTTGCAAAAGCGTAACATTTCCAAGAAGGCCAGACTTCGGCCAGCTGGGGACTAAATGCTTGGTTAAAGCCAACCACTTCCTAGCAAAAATACCTGAATCAGACATAAGCCATTATAATGTTAAGATAACCCCAGAAGTTACTTCTCGTAAAATGAAGAAGAATATAATGACCGAGTTGGTCAAACATTATAGAAGCGCAGAGCTGGGGATGCGACTGCCAGTTTATGATGGAGGAAGCAACCTGTACACAGCCGGATTGCTGCCTTTCATATCAAAAGAGTTCACTGTCATTTTGGCTAATGAAGAAGAGGGGGCAGCCACTCCCAGGGAACGAGAATTTAAAGTGCAGATAAAGTTTGTAACTTTGGCTAGCATGCACCAGTTACGAGAATTACTCCATGGCAAACAAGTTAATAACCCTCAAGAAGCTTTGACCATAATTGACATCGTCTTGAGGGAGCTCCATGCTCAAAGATATATATCAGTTGGGCGATCCTTTTATTCTCCTTGTATTAAGAAGCCTCAGCATATTGGGGGTGGTTTGCAAGCATGGCGTGGTTTCTATCAAAGCATCCGACCTACTCAAATGGGATTGTCACTAAATATTGACATGTCATCCACTGCATTCATTGAAGCAATCCCTGTCATTGATTTTGTTGCTCAAATTTTAAACAAAGACGTGTACTCAAGAACATTGTCCGATGCTGATCGTATTAAGGTCAAAAAAGTACTTAGAGGTGTAAAAGTTGAAGTTACACACCGAGGAAATGTACGAAGGAAATATCGAATTTCAGGGCTAACATCACAGCCTACAAGAGAGCTAATTTTCCCTCTTGATGAGCAGATGAACATGAAATCTGTAGTTGAATACTTCCAAGAGATGTATGGATATACCATTCAGTATACACATTTGCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGTGAATTATCTACCTATGGAGGCATGTAAGATACTCAAAGGACAGAGATACACAAAAGGATTGAATGAAAAGCAAATAACTTCCTTGTTGAAGGTTTCATGCCAAAGACCCTCTGATCAGGAAATGGACATTATTCAGACTGTTCATGAGAATGCATATGAGGCAGATCCATATGCAAAAGAATTTGGAATCAATATCGACAACAAGCTTACATCAGTTGAAGCACGAGTCCTTCCATCTCCATGGCTAAAATTTCATGACACTGGAAAAGAAAAGGAACATCAGCCTCAAGTTGGTCAGTGGAATATGATGAATAAGAAAGTAATAGATGGAAGTGTTGTAAGATACTGGGCTTGCATAAATTTCTCACGCAATGTCCAAGAGAACATTGCTCGTGGTTTCTGTCAACAGCTGGTCCAGATGTGCCAAATCTCTGGCATGGAATTTAACCCAGATCCTGCAATTCCTATATACTCAGCAAGACCAGAGCAAGTGAAGAAGGCCTTAAAATTTGTATATGGTGCAGTTTATAACAAACATGAAGGGAAAGAGTTAGATTTGCTGATAGCTATTCTTCCTGACAACAACGGCTCATTATATGGTGATCTTAAAAGGATCTGTGAAACAGAGTTGGGATTGATATCCCAGTGTTGTCTAACAAAGCACGTCTTCAAGAAGAGCAGACAGTACCTGGCAAATGTGTCACTTAAGATCAACGTCAAGATGGGTGGAAGAAACACTGTTCTTTTAGATGCTTTGCGGTCAAGAATTCCACTAGTCAGTGACATACCAACCATAATCTTCGGAGCTGATGTCACCCATCCAGAATCTGGAGAGGATTCTCTTCCATCAATAGCGGCTGTTGTGGCTTCCCAAGATTGGCCAGAGGTTACAAAATATGCTGGATTGGTATGTGCTCAGCCACACCGGGAGGAACTGATTCAAGATTTATTCAAAACATGGAAAGATCCTCACCGGGGCACGGTTGCCGGGGGTATGATAAGGGAGCTTTTGCTTTCATTTAAGAAGGCCACTGGACAAAAACCATTAAGGATTATATTCTACAGGGATGGGGTCAGTGAGGGTCAGTTCTACCAGGTTCTACTGCACGAACTCGATGCCATACGCAAGGCTTGTGCTTCACTAGAACCCAGTTACCAACCTCCAGTAACTTTTATCATTGTCCAAAAGCGACACCATACCAGACTTTTTGCATCCAATCACAATGATAGGAGTAGCACTGACAAGAGTGGTAATATTTTACCAGGTACTGTCGTGGATTCAAAGATATGTCATCCAACTGAGTTCGACTTTTATCTATGCAGTCACGCAGGAATCCAGGGAACAAGTCGTCCTGCACATTATCACGTTCTTTGGGATGAGAACAATTTCAGTGCAGATGAAATCCAATCTCTGACTAATAACCTCTGTTACACGTATGCTCGGTGCACAAGATCAGTCTCAGTAGTGCCTCCAGCATACTACGCTCATTTGGCCGCATACAGAGCTCGATTCTACGTAGACCCCGACGCACAGGAGAATGCCAAAAGATGCTGCACTCGAACCACAAATGGATCCTGCGTCCGGCCTCTGCCTGCGCTGAAAGAGAGAGTGAAAAATGTAATGTTCTATTGCTGA | 3018 | 41.65 | MRNCLLIKAKSPLKGTKELALISSESSSSSSSSSSCLSHDDAISVLKLDASSTCCYSYLGEIIERKEVTKKKKKEKREMPYMQMEPEEKHVIPSSQMALKSHHGSNDGEKTNLWKRKGRRRAKGPSMEGLKQKELDRNLEFPSSSSCKSVTFPRRPDFGQLGTKCLVKANHFLAKIPESDISHYNVKITPEVTSRKMKKNIMTELVKHYRSAELGMRLPVYDGGSNLYTAGLLPFISKEFTVILANEEEGAATPREREFKVQIKFVTLASMHQLRELLHGKQVNNPQEALTIIDIVLRELHAQRYISVGRSFYSPCIKKPQHIGGGLQAWRGFYQSIRPTQMGLSLNIDMSSTAFIEAIPVIDFVAQILNKDVYSRTLSDADRIKVKKVLRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVEYFQEMYGYTIQYTHLPCLQVGNQKKVNYLPMEACKILKGQRYTKGLNEKQITSLLKVSCQRPSDQEMDIIQTVHENAYEADPYAKEFGINIDNKLTSVEARVLPSPWLKFHDTGKEKEHQPQVGQWNMMNKKVIDGSVVRYWACINFSRNVQENIARGFCQQLVQMCQISGMEFNPDPAIPIYSARPEQVKKALKFVYGAVYNKHEGKELDLLIAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFKKSRQYLANVSLKINVKMGGRNTVLLDALRSRIPLVSDIPTIIFGADVTHPESGEDSLPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKTWKDPHRGTVAGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPSYQPPVTFIIVQKRHHTRLFASNHNDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYVDPDAQENAKRCCTRTTNGSCVRPLPALKERVKNVMFYC | 1005 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 25972240 | 25978807 | + | CrPI670011_06g019110.1 | Cre06g1911 | 501373 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre06g1911 | 1005 | Gene3D | paz domain | 352 | 477 | - | - | |
Cre06g1911 | 1005 | Pfam | PAZ domain | 363 | 489 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cre06g1911 | 1005 | Pfam | Mid domain of argonaute | 556 | 632 | IPR032473 | - | |
Cre06g1911 | 1005 | ProSiteProfiles | Piwi domain profile. | 647 | 968 | IPR003165 | GO:0003676(InterPro) | |
Cre06g1911 | 1005 | Pfam | Piwi domain | 648 | 966 | IPR003165 | GO:0003676(InterPro) | |
Cre06g1911 | 1005 | SMART | Piwi_a_2 | 647 | 968 | IPR003165 | GO:0003676(InterPro) | |
Cre06g1911 | 1005 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 155 | 974 | - | GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER) | |
Cre06g1911 | 1005 | Gene3D | - | 537 | 710 | - | - | |
Cre06g1911 | 1005 | FunFam | Protein argonaute-2 | 352 | 478 | - | - | |
Cre06g1911 | 1005 | ProSiteProfiles | PAZ domain profile. | 360 | 473 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cre06g1911 | 1005 | Pfam | Argonaute linker 2 domain | 502 | 545 | IPR032472 | - | |
Cre06g1911 | 1005 | FunFam | Argonaute 10 | 537 | 710 | - | - | |
Cre06g1911 | 1005 | CDD | Piwi_ago-like | 517 | 966 | IPR045246 | - | |
Cre06g1911 | 1005 | Pfam | N-terminal domain of argonaute | 164 | 297 | IPR032474 | - | |
Cre06g1911 | 1005 | MobiDBLite | consensus disorder prediction | 99 | 129 | - | - | |
Cre06g1911 | 1005 | Pfam | Argonaute linker 1 domain | 307 | 357 | IPR014811 | - | |
Cre06g1911 | 1005 | Gene3D | - | 716 | 1005 | IPR036397 | GO:0003676(InterPro) | |
Cre06g1911 | 1005 | SMART | PAZ_2_a_3 | 363 | 495 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cre06g1911 | 1005 | FunFam | protein argonaute 10-like | 716 | 1005 | - | - | |
Cre06g1911 | 1005 | SUPERFAMILY | PAZ domain | 353 | 512 | IPR036085 | GO:0005515(InterPro) | |
Cre06g1911 | 1005 | SMART | DUF1785_2 | 306 | 358 | IPR014811 | - | |
Cre06g1911 | 1005 | SUPERFAMILY | Ribonuclease H-like | 638 | 968 | IPR012337 | - | |
Cre06g1911 | 1005 | CDD | PAZ_argonaute_like | 358 | 472 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g0589 | Cre-Chr5:5234117 | Cre06g1911 | Cre-Chr6:25972240 | 0.00E+00 | dispersed | |
Cre05g2568 | Cre-Chr5:36895504 | Cre06g1911 | Cre-Chr6:25972240 | 9.30E-168 | dispersed | |
Cre06g1911 | Cre-Chr6:25972240 | Cre09g1062 | Cre-Chr9:10979770 | 1.60E-135 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre06g1911 | K11593 | - | csv:101213206 | 1810.42 |