Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre06g1938 | ATGAAGATTGAATCAGTATTATTGAAGGTGCCACCGGTATGGGCGGCGGCGGTGACGGCAGCGGTGGTGATAATTTTGAGTGCAAAAATGGGTTTAATTTTATGGTGGAAGCCACGAAGAATAGAAAAGCACTTTGATAGGGAAGGAATTCGAGGCCCTCCTTATCGTTTCTTCATTGGTAATTTCAAAGAACTTGTTTCTATGATGCTTGCTGCTTCTTCTCATCCAATGCCCAATTTCTCTCATAATATTCTCCCTCGTGTTCTCTCTTTTTACCATCATTGGAAGAAAATTTACGGCTCCACCTTCTTGATTTGGTTCGGACCAATCGTTCGTGTCGCCGTCTCCGACCCGGACATGATCCGAGAAATCTTCACCACAAATTCCCACTTCTACGAGAAGAACGAAGCTCATCCTCTTGTCAAACAGCTCGAAGGCAATGGCCTCCTCACTCTCAAAGGCCAAAAATGGGCTCTCCATCGCAAACTCATTTCCCCCACTTTCCATATGGATAATCTCAGATTGTTGATTCCGTTGGTGGAGGAAAGTGTGGTGGAAATGGTGGAGAAATGGTCGGCTATGGCGGAGAGTGTTGACTCCGGTGAAGTCGAGATCGATGTTTTCGAGTGCTTCCAAACCCTAACGGAAGATGTTATTACAAAAACAGTATTTGGTAGTAGCTATGAAGATGGTAAAGCTATATTTAAGCTTCAAACTCAACAAATGATATTAGCTTCTCAAGCTTTTCAACAGGTTTTCATTCCTGGCTATAGATTTCTACCGACAAGAACGAATATAAATTCGTGGAAATTAGACAAACAAATAAGGAAATCATTGATGAAATTAATCGAGGGTCGAAAATGGAATTCAGAAAAAAAGTGGGCAATGGATGAAAAAAGGCCAAAAGATTTGTTAGGGCTGATGATTCAAGCTTCCTCCTTAAAAAATAATAATTCCATTACTGTCCACGACATCGTTGAAGAATGCAAAGGCTTCTTCTTTGCTGGCAAACAAACTACTTCCAATCTGCTGACGTGGACTACTGTCTTGCTGGCAATGCATCCACAGTGGCAAATTCAGGCACGTGATGAGGTCTTTAACATCTGCGGTTCACGTGCCCTCCCTTCCAAAGATGATGTCTCCAAGTTCAAAATCCTGACCATGATACTAAATGAATCCTTACGGTTATACCCACCCACGGTGGCAACAATCCGACGTGCAAAGGCTGACGTGGAGCTAGGTGGAAGAATGATCCCATGTGGCACGGAGTTTTTGATTCCAATCCTGGCCGTTCATCATGATCAAACTATTTGGGGGAACGATGCAAGCGAGTTCAACCCGGGGCGGTTCTCAGAAGGAGTGGGTCGAGCCGGAAATCACCCGGCCGGGTTTATTCCGTTTGGACTTGGGGTTCGTACTTGCATTGGCCAAAATCTAGCGGTTTTGGAAGCAAAATTAACAATGGCAATTATACTTCAACGGTTCACGTTTCGTTTGGCTCCTACTTATCAGCATGCACCAACGGTCCTGATGCTTCTCTATCCACAATATGGGGCCCCCATTATTTTTCAAAAGATACCCCTAAATTAA | 1590 | 43.84 | MKIESVLLKVPPVWAAAVTAAVVIILSAKMGLILWWKPRRIEKHFDREGIRGPPYRFFIGNFKELVSMMLAASSHPMPNFSHNILPRVLSFYHHWKKIYGSTFLIWFGPIVRVAVSDPDMIREIFTTNSHFYEKNEAHPLVKQLEGNGLLTLKGQKWALHRKLISPTFHMDNLRLLIPLVEESVVEMVEKWSAMAESVDSGEVEIDVFECFQTLTEDVITKTVFGSSYEDGKAIFKLQTQQMILASQAFQQVFIPGYRFLPTRTNINSWKLDKQIRKSLMKLIEGRKWNSEKKWAMDEKRPKDLLGLMIQASSLKNNNSITVHDIVEECKGFFFAGKQTTSNLLTWTTVLLAMHPQWQIQARDEVFNICGSRALPSKDDVSKFKILTMILNESLRLYPPTVATIRRAKADVELGGRMIPCGTEFLIPILAVHHDQTIWGNDASEFNPGRFSEGVGRAGNHPAGFIPFGLGVRTCIGQNLAVLEAKLTMAIILQRFTFRLAPTYQHAPTVLMLLYPQYGAPIIFQKIPLN | 529 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 26626554 | 26628732 | + | CrPI670011_06g019380.1 | Cre06g1938 | 501400 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre06g1938 | 529 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 21 | 518 | IPR050665 | GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER) | |
| Cre06g1938 | 529 | PRINTS | P450 superfamily signature | 474 | 485 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | PRINTS | P450 superfamily signature | 335 | 352 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | PRINTS | P450 superfamily signature | 465 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | PRINTS | P450 superfamily signature | 388 | 399 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | SUPERFAMILY | Cytochrome P450 | 82 | 524 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | FunFam | Cytochrome P450 734A1 | 35 | 527 | - | - | |
| Cre06g1938 | 529 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 467 | 476 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre06g1938 | 529 | Pfam | Cytochrome P450 | 89 | 505 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | Gene3D | Cytochrome P450 | 34 | 525 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | PRINTS | E-class P450 group I signature | 214 | 232 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | PRINTS | E-class P450 group I signature | 324 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | PRINTS | E-class P450 group I signature | 464 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | PRINTS | E-class P450 group I signature | 474 | 497 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | PRINTS | E-class P450 group I signature | 96 | 115 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g1938 | 529 | PRINTS | E-class P450 group I signature | 344 | 370 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre06g1938 | Cre-Chr6:26626554 | Cre11g2119 | Cre-Chr11:32905894 | 3.90E-109 | dispersed | |
| Cre03g1792 | Cre-Chr3:34759697 | Cre06g1938 | Cre-Chr6:26626554 | 4.10E-116 | transposed | |
| Cre11g0766 | Cre-Chr11:4859582 | Cre06g1938 | Cre-Chr6:26626554 | 1.70E-226 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre06g1938 | K15639 | - | csv:101213466 | 944.11 |