Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2036 ATGGGCGTCACCATTCTTCCAGATCTCGGGGCTCAGATTTTCATTCCCCTTTGTGCTCTAGTCGGAATCCTCTTCTCTTTGGTGCAGTGGTACTACGTTTCACAAGTTAAGCTCTCTTCTTCCCGAGATTCCTCTAATAACAACTCCGCCGCTGCTAAAAATGGCTACTCCGACTACCTTATTGAGGAGGAAGAAGGTGTCAACGACCATAACGTTGTTATTAAATGTGCCGAAATTCAGAACGCCATCTCTGAGGGGGCAACCTCCTTCCTTTTCACGGAGTACTACTATGTTGGCATATTTATGGTATTGTTTGCAGTCTTGATTTTTGTATTCCTTGGGTCAGTGGAGGGTTTTAGTACCAAGCCCCAAGCGTGCTCATATGACAAAACAAAGACTTGCAAGCCAGCTTTGGCGACGGCTATATTCAGCACTATATCGTTTGTACTTGGTGCAGTTACTTCAGTGGTTTCTGGATTCCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACCACCTTGGAGGCAAGAAAAGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCTGCCAATGGTCTCTTGGTTTTGTTTATTGCCATTAACCTCTTCAAATTGTACTATGGTGAAGATTGGGGTGGTCTTTTTGAGTCCATCACTGGGTATGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGTAGAGTTGGTGGTGGTATCTACACTAAAGCTGCTGATGTTGGTGCTGACCTTGTGGGTAAGGTGGAAAGGAACATTCCTGAGGATGATCCAAGAAATCCAGCTGTGATTGCTGATAACGTCGGTGACAATGTTGGGGATATTGCCGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAATCATCCTGTGCTGCTCTTGTTGTTGCTTCTATCTCCTCTTTCGGCAACAACCATGAGTTCACACCAATGCTCTATCCACTCATAGTTAGTTCTATGGGTATCCTTGTTTGCCTGATCACCACTTTATTTGCAACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTCATAATTTCCACTGTTCTAATGACCTTTGGAATTGCAATTGTTACTTGGTTGGCTGTTCCATCGAAATTCACCATCTTCAATTTTGGAACTCAAAAAGTTGTACAGAACTGGGAACTTTTCTTGTGCGTTGCTGTTGGTCTTTGGGCTGGGCTTATAATAGGATTTGTGACAGAGTATTACACTAGCAATGCATACAGCCCCGTGCAAGATGTTGCTGATTCTTGCCGAACTGGAGCTGCTACAAATGTTATTTTTGGCTTGGCCTTGGGATACAAATCTGTCATTATCCCTATTTTTGCAATTGCAGTTAGCATTTTTGTGAGTTTCTCCTTTGCTGCAATGTATGGCATTGCCGTTGCTGCCCTTGGAATGTTGAGTACAATTGCTACTGGTTTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGCATTGCAGAGATGGCTGGCATGAGCCACAGAATTCGGGAGAGAACCGATGCCCTCGATGCTGCTGGAAACACAACTGCAGCCATTGGGAAGGGTTTTGCCATTGGCTCAGCTGCTCTTGTGTCCCTTGCCCTCTTCGGTGCCTTTGTCAGCCGTGCTGGTGTCAGTGTTGTTGACGTCTTGACACCCAAAGTTTTCATTGGCTTGATCGTGGGTGCTATGTTGCCCTACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGGAGTGCAGCCCTAAAGATGGTTGAGGAGGTGCGAAGGCAATTTAACACCATCCCAGGTCTCATGGAGGGTACCGCCAAGCCCGACTATGCTACATGTGTCAAGATCTCAACTGATGCTTCTATCAAGGAGATGATCCCACCTGGTGCCCTTGTCATGTTGACACCCCTAATTGTTGGTATCCTATTTGGAGTCGAAACTCTTTCTGGCGTTCTTGCTGGATCCCTTGTTTCTGGTGTGCAGATTGCTATCTCTGCATCCAACACCGGAGGTGCCTGGGACAATGCTAAGAAGTACATCGAGGCTGGTGCCTCTGAGCATGCAAGAACCCTTGGCCCGAAAGGATCAGATCCACACAAAGCCGCTGTTATCGGTGACACAATCGGAGACCCACTCAAAGATACATCGGGACCTTCCCTCAACATTCTTATCAAGTTGATGGCTGTTGAGTCCCTTGTGTTTGCTCCTTTCTTCGCCAGCCACGGTGGTATTCTCTTCAAGATCTTCTAA 2307 45.99 MGVTILPDLGAQIFIPLCALVGILFSLVQWYYVSQVKLSSSRDSSNNNSAAAKNGYSDYLIEEEEGVNDHNVVIKCAEIQNAISEGATSFLFTEYYYVGIFMVLFAVLIFVFLGSVEGFSTKPQACSYDKTKTCKPALATAIFSTISFVLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGEDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHEFTPMLYPLIVSSMGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIVTWLAVPSKFTIFNFGTQKVVQNWELFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVSVVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFASHGGILFKIF 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28110351 28114755 + CrPI670011_06g020360.1 Cre06g2036 501498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2036 768 Pfam Inorganic H+ pyrophosphatase 74 753 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cre06g2036 768 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 766 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cre06g2036 768 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 758 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cre06g2036 768 PIRSF H+-PPtase 12 766 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cre06g2036 768 NCBIfam V-type H(+)-translocating pyrophosphatase 12 763 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1823 Cre-Chr2:31522459 Cre06g2036 Cre-Chr6:28110351 0.00E+00 dispersed
Cre06g2036 Cre-Chr6:28110351 Cre09g0164 Cre-Chr9:1876189 4.70E-116 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2036 K23025 - csv:101222673 1443.33