Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2069 ATGGAAAGGGAAGCCGTTAACCGCGTATTCTCTCTCTCCCTTCACCCGCTCGCTCACTCACGGCCACGCAAGGGAAAAAAAACCCCTCTCTTGTACGCTTCTATCTTGAGAAGCCGCTCGCCTCCGTCCAACTGCCGCCACCGTCAACTGGAGTCCGCCGCCGCCTCGTCACCGCTGACGTTCACTCCCACAGGTTCGCCGCCAAATTCGGTGTTGTGCTGGGTTGCAAGGGACTTTGAGTTTATCGTTAAGGGAGGGCTTATGTTTGAGAATTCTTGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTACCTTCGAAACTGAATTAGGTGGTGTCATTCCGGTTGTCAAAGCATCTATTGATGGCACTCGCATTATTGGCCGTCTTTGTGCTGAACTTCAGCATTTGAGGAACAGTCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTTTGGGGAATACAATTGCTTGTAACGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCAGGCAACGTTCTCGTGGGAAGCTACTGTAATTTCACGAATAGGGGCGGCTTGGTTCATCCACATACATCTGTTGAAGATTTGGATGAGCTATCAACCCTTCTTCAAGTCCCTTTAGTTGCTGGAACTGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCATTTTGTGGTTCTGACACCACTGCCACCGAGTTATCGGTCATTGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGACAGTTATGTGTGA 939 47.71 MEREAVNRVFSLSLHPLAHSRPRKGKKTPLLYASILRSRSPPSNCRHRQLESAAASSPLTFTPTGSPPNSVLCWVARDFEFIVKGGLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCAELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28457668 28462324 + CrPI670011_06g020690.1 Cre06g2069 501531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2069 312 NCBIfam translation initiation factor IF-6 88 291 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cre06g2069 312 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 87 311 IPR002769 GO:0000054(PANTHER)|GO:0000460(PANTHER)|GO:0000470(PANTHER)|GO:0005730(PANTHER)|GO:0005829(PANTHER)|GO:0030687(PANTHER)|GO:0042256(InterPro)|GO:0043022(InterPro)|GO:0043023(PANTHER)|GO:1902626(PANTHER)
Cre06g2069 312 SMART eIF6neu2 87 271 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cre06g2069 312 Hamap Translation initiation factor 6 [eif6]. 71 312 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cre06g2069 312 Gene3D - 86 292 - -
Cre06g2069 312 SUPERFAMILY Pentein 89 291 - -
Cre06g2069 312 CDD IF6 89 290 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cre06g2069 312 FunFam Eukaryotic translation initiation factor 6 84 292 - -
Cre06g2069 312 Pfam eIF-6 family 88 270 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0370 Cre-Chr2:836283 Cre06g2069 Cre-Chr6:28457668 7.60E-122 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2069 K03264 - csv:101207707 414.846