Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2268 ATGAAGAACTTACCTCTCTACATCCTCCGATCTCCTCCGCGGTCTCTTCTCCGGTTGCCGCTGCCGGTCGCCAGCCCCTTCTTGTCTCACCTCTCCTATTTCATAACCATCTCTCTCTTAGGCTTTGGAGCTCTAAAGCTCACCAAAACTAGAAACTCCTCCTCCCCAAATGACCTCAACATTTTCTTCACCTCCGTCTCTGCCGTCTCCGTTTCAAGCATGTCCGTCATCGAAATGGAAGTTTTTTCCAATTTCCAACTCCTCATCATCACCACCCTCATGTTCCTCGGCGGCGAAGTCTTCGTCTCTGCTGTCGGGTTCCAACTCTCTCGCCGGTTCAAATACTTGAACGAGAAAAACCAAGTCGATTCGGCTCGGTCCACTGAGATGGAAAGTGGGACGTCGTCATCAACGACGGCCACCATTGATGAGTTGAGTATCTCAAAATCATGTTCAAAGCTTTTGGGTCGTACGATAATTGGATATCTTTTGATGACAAATGGTGTTGGTTCTTGTTTAATCTTCATTTACATCATCACGATCCCCCATGCAAAGCAAGTGCTTGAAAGCAAAGGCATCAACTTCCTTACTTTTTCAATTTTTAGTACAGTTTCTACTTTTACCAACTGTGGCTTCATACCTACTAATGAAAATATGATCGCTTTCAAGAACAACTCTGGCCTTTTGCTCATACTCATCTCGCAGGTGCTGTTGGGAGGTTGTTTATATCCGGTGGGTCTCCGGTTGGCAATAATGGCGGCGGCGAAGGTGACGGGGAAGAAGGAGTGGAGATACATATTGAAGAACTACTCAGAGATGGGGTATTCTCATCTTTTGTCGGGGCTCCGGTGTGGATTTCTGGCTGTGACCGCAGTGGGATTCATAATTTTGCAATTGATTATCTTTTGCTCATTGGAATGGAACAACTCCGCCGGAATTTGGGATGGCTTGAATCCCTACCAGAAGTTTGTGGGATCACTTTTTCAGGTGACAAACTCAAGACATGCCGGAGAGTCGGTGGTGGATATCTCGGTCATCTCGCCCGCGATCTTGGTAGTTTTTGTTGTCATGATGTATCTCCCACCATACACAACCTTTTTACCCATAAGGAACAAAGAGATAGCTTCAATGTCACATGGGAAGGACAAAAGACAACACTTTGTGGAATTATTCACATTCTCACAGCTCTCCTATTTGGCCATTTTTATCATTCTCATATGCATCACAGAGAAAGAAAAGCTAAGAGATGATCCCCTTAACTTTACTGTTCTCAACATCACCCTTGAAGTGATCAGTGCATATGGAAATGTTGGGTTCTCAAGTGGGTATAGCTGCAAAAGACAAGTAAAAGTTGATAGCTCTTGCAAAGATGCATGGTATGGATTTGCTGGAAGATGGAGTGCAAAGGGAAAATTCATTCTAATTCTTGTCATGTTCTTTGGAAGAATGAAAAGTTTTAGTATGCATAGTGGTAGAGCTTGGAAATTATCATGA 1494 44.11 MKNLPLYILRSPPRSLLRLPLPVASPFLSHLSYFITISLLGFGALKLTKTRNSSSPNDLNIFFTSVSAVSVSSMSVIEMEVFSNFQLLIITTLMFLGGEVFVSAVGFQLSRRFKYLNEKNQVDSARSTEMESGTSSSTTATIDELSISKSCSKLLGRTIIGYLLMTNGVGSCLIFIYIITIPHAKQVLESKGINFLTFSIFSTVSTFTNCGFIPTNENMIAFKNNSGLLLILISQVLLGGCLYPVGLRLAIMAAAKVTGKKEWRYILKNYSEMGYSHLLSGLRCGFLAVTAVGFIILQLIIFCSLEWNNSAGIWDGLNPYQKFVGSLFQVTNSRHAGESVVDISVISPAILVVFVVMMYLPPYTTFLPIRNKEIASMSHGKDKRQHFVELFTFSQLSYLAIFIILICITEKEKLRDDPLNFTVLNITLEVISAYGNVGFSSGYSCKRQVKVDSSCKDAWYGFAGRWSAKGKFILILVMFFGRMKSFSMHSGRAWKLS 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30590602 30595984 + CrPI670011_06g022680.1 Cre06g2268 501730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2268 497 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 20 494 IPR051143 GO:0005886(PANTHER)|GO:0008324(PANTHER)
Cre06g2268 497 Pfam Cation transport protein 46 487 IPR003445 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g2266 Cre-Chr6:30544863 Cre06g2268 Cre-Chr6:30590602 1.90E-07 dispersed
Cre06g2267 Cre-Chr6:30554749 Cre06g2268 Cre-Chr6:30590602 7.00E-61 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2268 K24976 - csv:101206239 803.897