Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2279 ATGGAAAATGTGTGCATCGCTCTCTTCATTCTCTTAATTTCATTTTTCTCATTTGCCCTTTTCATCCTCTTCTATCGTCACAAGGCTCAATTCGCCTACCCCAACATTCCCCCGGGCAGCATCGGTTACCCGATCGTAGGGGAGACTCTACAAATGGTTGCCCACGAGAGGAACGGGCAGCCGGAGAATTTTATCTTTGAGCGCGCCGCCAAGTACAAGACGGAGATTTTCACGACTTCCGTCCTCGGGGAGCCGACCGCCGCCTTCTGCTCCGCCGCGGGGAATAAGCTTCTGTTCTCAAACGAGCAGAAATTAGTGACTCCGTGGTGGCCGAAATCCGCTGATAAAGTGTTTCCTTCTACCGTTAAGTATAATACGAATGAAGAAGCAAAGAGAACCAAGAATTTACTCCCTCAATTCATAAAGCCAGAAGCGCTTCGGCGATATGTTGGAGTGATGGACTCTATTGCTCAAAAGCACTTCGCTTCCATGTGGGAAAATAAGAAAGAAATCGTCGTCGTTTCCACTCTAAAAGATTATACGTTCTCCCTTGCATGTTGGTTGTTCATGAGCATGGAGGATGTAAACGAGGTACAAAGAATCTTCAAGAGGTTTGAAGAGATAGCGTCGGGGATTATATCAGTACCGATAGATTTTCCGGGAACAATGTTCAGGAAAGCCATAAAAGCATCGGAGTTTGTGAGGAAGGAGCTGTTGGGGATCATAAGGCAGCGAAAAATAGATCTAAGCGAAGGGAAGGCATCAGCGACGCAAGACATTCTATCACACATGCTTTTGGCCACTGACAGCAACGGCCAATTCATTCATGAAGAAGATATTGCCGCTAAAATTCTTGGTCTACTCGTCGGTGGACACGATACCGGCGTCTGTACTTGCACTTTCGTTGTCAAGTACTTGGCTGCTCTTCCCCACGTCTACGAAAATGTCTACAATGAGCAAATGGAGATAGCAAGATCAAAGACAGCAGGTGAACTATTGACTTGGGAAGATCTTCAGAAGATGAAGTATTCATGGAATGTAGTTTGTGAAGTGCTTAGACTCTTCCCTCCAGTTCAAGGAGCTTTCAGGGTTGCCCTCACTGACTTTGTCTTTAATGGCTTCTATATCCCCAAGGGCTGGAAGTTGTATTGGAGTGCGGCAGCAACACACAAAAACGCAGAGTACTTTGCGGAGCCATTAAAGTTCGAGCCAAAGAGGTTCGAAGGGAAAGGTCCGGCTCCGTTCACGTACGTGCCGTTCGGGGGTGGTCCAAGAATGTGCCCCGGCAAAGAGTACGCGCGGCTCGAGGTCCTTGTTTTCATGCACCATTTGATCAAGCGTTTCAGACTCCAACTTTGCCTTCCCCACGAAGAGGTCACCGCCAATCCAATTCCCACTCCCCTCCACGGCCTTCCGGTTCGTCTCTTTCCCCACGCGCCGCCGCCCCATTATTCTTCGTCCCCCTAA 1467 48.47 MENVCIALFILLISFFSFALFILFYRHKAQFAYPNIPPGSIGYPIVGETLQMVAHERNGQPENFIFERAAKYKTEIFTTSVLGEPTAAFCSAAGNKLLFSNEQKLVTPWWPKSADKVFPSTVKYNTNEEAKRTKNLLPQFIKPEALRRYVGVMDSIAQKHFASMWENKKEIVVVSTLKDYTFSLACWLFMSMEDVNEVQRIFKRFEEIASGIISVPIDFPGTMFRKAIKASEFVRKELLGIIRQRKIDLSEGKASATQDILSHMLLATDSNGQFIHEEDIAAKILGLLVGGHDTGVCTCTFVVKYLAALPHVYENVYNEQMEIARSKTAGELLTWEDLQKMKYSWNVVCEVLRLFPPVQGAFRVALTDFVFNGFYIPKGWKLYWSAAATHKNAEYFAEPLKFEPKRFEGKGPAPFTYVPFGGGPRMCPGKEYARLEVLVFMHHLIKRFRLQLCLPHEEVTANPIPTPLHGLPVRLFPHAPPPHYSSSP 488
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 30715970 30720990 + CrPI670011_06g022790.1 Cre06g2279 501741
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2279 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre06g2279 488 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g2279 488 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g2279 488 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g2279 488 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g2279 488 FunFam Taxadiene 5-alpha hydroxylase 27 478 - -
Cre06g2279 488 PANTHER CYTOCHROME P450 26 35 455 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cre06g2279 488 Gene3D Cytochrome P450 26 477 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g2279 488 CDD CYP90-like 68 477 - -
Cre06g2279 488 Pfam Cytochrome P450 37 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g2279 488 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g2279 488 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g2279 488 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g2279 488 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre06g2279 488 SUPERFAMILY Cytochrome P450 31 477 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1448 Cre-Chr3:27734479 Cre06g2279 Cre-Chr6:30715970 1.40E-187 dispersed
Cre05g1586 Cre-Chr5:24790742 Cre06g2279 Cre-Chr6:30715970 7.80E-85 dispersed
Cre05g1587 Cre-Chr5:24812445 Cre06g2279 Cre-Chr6:30715970 1.70E-92 dispersed
Cre06g2279 Cre-Chr6:30715970 Cre07g1471 Cre-Chr7:29938299 6.40E-58 dispersed
Cre06g2279 Cre-Chr6:30715970 Cre08g1540 Cre-Chr8:28014050 1.70E-63 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2279 K20667 - rcu:8282886 655.981