Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre06g2306 | ATGGGGAGTGGAACTCTCGTGGACGGTGTTCGTCGCTGGTTTCAACGTCGCACTTCTTCTTCTTCTTCCACTTCTACTTCTAATTTTGGTTCTAGTTCTGATTCTTCTGATCCTAATCTCAATTACCCTAATCACCATAAGTTTGACCATGTTGATAATGGTGGTGTTAATGGTGACCAATTGTTGAGTAGCGATTTACGCGCCCAATCAACCATTACCCACAAACGCAAACCTCTAAGGAAACAACCCCAACTTGGAGGAGAAGGGATTCTTGAGCAATTACCTGAGGAGGAGGACGACGATCTTGATTACTCTGCCTTGAAGCTCATCAAAGTTCCTAAACGAACAAATCACTTCAGACATCCTCCTCCTCCTGCTTTAATGGACTCCCACAAGAAGGGTGGGTTGGAAACAGAATTTTTCACAGAGTATGGAGAGGCCAGCAGATATCAGGTTCAAGAAATAATCGGTAAAGGCAGCTATGGGGTTGTCGGTTCCGCCGTTGATACCCATACTGATGAGAAGGTTGCAATTAAGAAAATTAATGATGTTTTTGAGCATGTTTCTGATGCCACAAGGATTTTAAGAGAAATTAAACTCCTACGGCTGCTCCGTCATCCAGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTCAGAGATATTTATGTTGTTTTTGAATTGATGGAATCTGACCTTCACCAAGTAATTAAGGCCAATGATGATCTCACTCCTGAGCATCATCAGTTTTTCTTGTACCAGCTTCTTCGTGGTCTGAAATATATTCATACAGCAAATGTATTTCATCGTGATTTAAAGCCCAAAAACATTTTAGCTAATGCCGACTGCAAACTGAAAATTTGTGATTTTGGACTTGCTCGTGTATCATTTAATGATGCACCATCTGCTATTTTCTGGACTGACTATGTTGCGACTCGGTGGTATCGTGCTCCTGAACTTTGTGGCTCTTTTTTCTCAAAATACACTCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCGGAAATGCTCACTGGAAAACCGCTGTTTCCTGGGAAAAATGTGGTGCACCAACTGGATCTGATGACTGATGTGCTTGGCACACCTTCCGCTGAGTCCATTGCTAGGATTCGGAATGAAAAGGCAAGAAGATACCTTAGTAACATGAGGAGAAAGCAGCCTGTTCCTCTCACACAAAAGTTTCCCAATGCCGATCCCTTGGCTCTCCGCTTGCTTCAACGCCTGCTTGCATTTGATCCCAAAGATCGTCCCACTGCTGAAGAGGCATTAGCTGATCCGTATTTTCATGGTTTGGCTAACGTGGATCGGGAACCATCAACACAACCAATTTCAAAACTTGAGTTTGAATTTGAGAGAAGAAAGTTAACAAAAGATGATGTTAGAGAATTAATTTATCGAGAGATCTTGGAGTATCATCCTCAGATGCTACAGGAATATCTCCGCAGTGGAGAACAAACAAGCTTCATGTACCCAAGTGGGGTTGATCGCTTCAAACGCCAGTTTGCACATCTAGAGGAACATTATGGCAAGGGTGAAAGAAGTACTCCACTTCAAAGACAGCATGCTTCATTGCCCAGGGAAAGGGTTTGTGCACCAAAAGATGAATCCGAACAACACAATGATTTAGAAGGAAGAAATGTTGCTACATCTCTTCAAAGTCCCCCAAAGTCGCAAGGAGATGGTTCCGAAAATGCAAACGGTAATGAACAAAATGGACCAAACAAGCCAAATTACAGTGCTCGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCCTCTAAATGTATAGATGTTAAACCAAGAAAAGACCTAGAGGAGGAACCGATTACCGAGATGAATGACGAGGCAATTGATGGATTGTCTCATAAGGACATTTTGGCTACAAGGCAAAGTGTAGCGAAGTTTCTGAAGTCAGGTTGTTACCCTCGTGTAGCATGA | 1974 | 42.45 | MGSGTLVDGVRRWFQRRTSSSSSTSTSNFGSSSDSSDPNLNYPNHHKFDHVDNGGVNGDQLLSSDLRAQSTITHKRKPLRKQPQLGGEGILEQLPEEEDDDLDYSALKLIKVPKRTNHFRHPPPPALMDSHKKGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAVDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDVLGTPSAESIARIRNEKARRYLSNMRRKQPVPLTQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVCAPKDESEQHNDLEGRNVATSLQSPPKSQGDGSENANGNEQNGPNKPNYSARSLLKSASISASKCIDVKPRKDLEEEPITEMNDEAIDGLSHKDILATRQSVAKFLKSGCYPRVA | 657 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 31024317 | 31029940 | + | CrPI670011_06g023060.1 | Cre06g2306 | 501768 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre06g2306 | 657 | ProSitePatterns | Protein kinases ATP-binding region signature. | 156 | 180 | IPR017441 | GO:0005524(InterPro) | |
Cre06g2306 | 657 | MobiDBLite | consensus disorder prediction | 539 | 555 | - | - | |
Cre06g2306 | 657 | MobiDBLite | consensus disorder prediction | 520 | 593 | - | - | |
Cre06g2306 | 657 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 147 | 482 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Cre06g2306 | 657 | SMART | serkin_6 | 150 | 441 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre06g2306 | 657 | MobiDBLite | consensus disorder prediction | 16 | 42 | - | - | |
Cre06g2306 | 657 | Pfam | Protein kinase domain | 150 | 441 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre06g2306 | 657 | Gene3D | Transferase(Phosphotransferase) domain 1 | 236 | 464 | - | - | |
Cre06g2306 | 657 | FunFam | Mitogen-activated protein kinase | 465 | 487 | - | - | |
Cre06g2306 | 657 | ProSiteProfiles | Protein kinase domain profile. | 150 | 441 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre06g2306 | 657 | MobiDBLite | consensus disorder prediction | 16 | 61 | - | - | |
Cre06g2306 | 657 | FunFam | Mitogen-activated protein kinase | 236 | 464 | - | - | |
Cre06g2306 | 657 | FunFam | Mitogen-activated protein kinase | 139 | 244 | - | - | |
Cre06g2306 | 657 | Gene3D | Phosphorylase Kinase; domain 1 | 166 | 487 | - | - | |
Cre06g2306 | 657 | CDD | STKc_TDY_MAPK | 149 | 486 | - | - | |
Cre06g2306 | 657 | ProSitePatterns | MAP kinase signature. | 185 | 288 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre06g2306 | 657 | MobiDBLite | consensus disorder prediction | 556 | 593 | - | - | |
Cre06g2306 | 657 | SUPERFAMILY | Protein kinase-like (PK-like) | 146 | 446 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g1328 | Cre-Chr6:7231211 | Cre06g2306 | Cre-Chr6:31024317 | 1.90E-207 | dispersed | |
Cre06g2306 | Cre-Chr6:31024317 | Cre07g1403 | Cre-Chr7:28935437 | 3.50E-184 | dispersed | |
Cre03g1273 | Cre-Chr3:18957520 | Cre06g2306 | Cre-Chr6:31024317 | 1.30E-209 | transposed | |
Cre07g1026 | Cre-Chr7:13598636 | Cre06g2306 | Cre-Chr6:31024317 | 1.70E-207 | transposed | |
Cre01g1407 | Cre-Chr1:27341812 | Cre06g2306 | Cre-Chr6:31024317 | 9.40E-209 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64235 | PF00069 | Pkinase | 1.90E-68 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre06g2306 | - | - | - | 0.0 |